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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   543096   flowering time control protein FCA 
 osa-u.5   4346429   flowering time control protein FCA 
 zma-u.5   100383162   RNA binding 
 ath-u.5   FCA   flowering time control protein FCA 
 gma-u.5   100798390   flowering time control protein FCA 
 gma-u.5   100786792   flowering time control protein FCA 
 sly-u.5   101267262   flowering time control protein FCA 
 vvi-u.5   FCA   flowering time control 
 ppo-u.5   18102616   flowering time control protein FCA 
 mtr-u.5   11418334   flowering time control protein FCA 

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Top 50 coexpressed genes to 543096 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 543096 (tae-r.2 coexpression data)

CoexMap"543096"


taeLOC543096 | Entrez gene ID : 543096    
Species tae osa zma ath gma sly vvi ppo mtr sbi nta bra cre hvu cit bdi sot bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044380779.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_044380779.1)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for XP_044380779.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
543096

.
osa-u.5
for
4346429

.
zma-u.5
for
100383162

.
ath-u.5
for
FCA

.
gma-u.5
for
100798390

.
gma-u.5
for
100786792

.
sly-u.5
for
101267262

.
vvi-u.5
for
FCA

.
ppo-u.5
for
18102616

.
mtr-u.5
for
11418334

.


Ortholog ID: 10857
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol FCA LOC100786792 LOC100798390 LOC101267262 LOC4346429 LOC100383162 FCA FCA LOC18102616 LOC11418334 LOC123111501 LOC123120723 LOC123399188 LOC107896590 LOC107916225 LOC125575626 LOC106367467 LOC110432370 LOC102581555 LOC102613412 LOC100836687 LOC107792724 LOC107794627
Function* flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA RNA binding flowering time control protein FCA flowering time control flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA-like flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA-like flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA flowering time control protein FCA
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 4
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi03013 Nucleocytoplasmic transport 4
ghi03040 Spliceosome 4
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 4
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03420 Nucleotide excision repair 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03015 mRNA surveillance pathway 5
nta03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827323 100786792 100798390 101267262 4346429 100383162 103869778 100255122 18102616 11418334 123111501 123120723 123399188 107896590 107916225 125575626 106367467 110432370 102581555 102613412 100836687 107792724 107794627
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