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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103650933   splicing factor 3B subunit 4 
 zma-u.5   100384862   RNA recognition motif-containing protein 
 zma-u.5   100193321   uncharacterized LOC100193321 
 osa-u.5   107277261   uncharacterized LOC107277261 
 osa-u.5   4338860   uncharacterized LOC4338860 
 ath-u.5   AT4G10110   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100803118   splicing factor 3B subunit 4 
 gma-u.5   100784532   splicing factor 3B subunit 4-like 
 sly-u.5   101258326   uncharacterized LOC101258326 
 vvi-u.5   100244774   uncharacterized LOC100244774 
 vvi-u.5   100252755   hypothetical protein 
 ppo-u.5   18108414   uncharacterized LOC18108414 
 mtr-u.5   11408527   RNA-binding protein 7 

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Top 50 coexpressed genes to 103650933 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103650933 (zma-u.5 coexpression data)

CoexMap"110433766"


sbiLOC110433766 | Entrez gene ID : 110433766    
Species zma osa ath gma sly vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 2 1 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG sbi03040 [list] [network] Spliceosome (208 genes)
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
Protein XP_021312010.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  cyto_nucl 3  (predict for XP_021312010.1)
Subcellular
localization
TargetP
other 7  (predict for XP_021312010.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103650933

.
zma-u.5
for
100384862

.
zma-u.5
for
100193321

.
osa-u.5
for
107277261

.
osa-u.5
for
4338860

.
ath-u.5
for
AT4G10110

.
gma-u.5
for
100803118

.
gma-u.5
for
100784532

.
sly-u.5
for
101258326

.
vvi-u.5
for
100244774

.
vvi-u.5
for
100252755

.
ppo-u.5
for
18108414

.
mtr-u.5
for
11408527

.


Ortholog ID: 6296
Species ath gma gma sly osa osa zma zma bra vvi vvi ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sot cit bdi bdi nta nta
Symbol AT4G10110 LOC100803118 LOC100784532 LOC101258326 LOC4338860 LOC107277261 LOC100193321 LOC100384862 LOC103838899 LOC100244774 LOC100252755 LOC18108414 LOC11408527 LOC123079955 LOC123182104 LOC123444750 LOC123443116 LOC121216283 LOC107959793 LOC106359693 LOC106439150 LOC110430206 LOC102602409 LOC102612062 LOC100841208 LOC104582652 LOC107816527 LOC107806640
Function* RNA-binding (RRM/RBD/RNP motifs) family protein splicing factor 3B subunit 4 splicing factor 3B subunit 4-like uncharacterized LOC101258326 uncharacterized LOC4338860 uncharacterized LOC107277261 uncharacterized LOC100193321 RNA recognition motif-containing protein RNA-binding protein 7 uncharacterized LOC100244774 hypothetical protein uncharacterized LOC18108414 RNA-binding protein 7 splicing regulator RBM11 RNA-binding protein 7 splicing regulator RBM11-like spliceosome-associated protein 49 RNA-binding protein 7 RNA-binding protein 7 spliceosome-associated protein 49 splicing factor 3B subunit 4 splicing factor 3B subunit 4-like splicing factor 3B subunit 4 uncharacterized LOC102612062 spliceosome-associated protein 49 splicing regulator RBM11 uncharacterized LOC107816527 uncharacterized LOC107806640
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma04120 Ubiquitin mediated proteolysis 3
zma04141 Protein processing in endoplasmic reticulum 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 6
zma03040 Spliceosome 3
zma04141 Protein processing in endoplasmic reticulum 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 5
bna00513 Various types of N-glycan biosynthesis 5
bna04141 Protein processing in endoplasmic reticulum 5
bna03040 Spliceosome 2
bna00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00510 N-Glycan biosynthesis 3
bna00513 Various types of N-glycan biosynthesis 3
bna04141 Protein processing in endoplasmic reticulum 3
bna00270 Cysteine and methionine metabolism 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00564 Glycerophospholipid metabolism 3
sot00440 Phosphonate and phosphinate metabolism 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 8
bdi04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 4
nta03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03015 mRNA surveillance pathway 2
nta03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826602 100803118 100784532 101258326 4338860 107277261 100193321 100384862 103838899 100244774 100252755 18108414 11408527 123079955 123182104 123444750 123443116 121216283 107959793 106359693 106439150 110430206 102602409 102612062 100841208 104582652 107816527 107806640
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