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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11417849   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 mtr-r.5   11417849   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 mtr-u.5   11445827   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 mtr-u.5   11438267   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 mtr-u.5   11413051   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 gma-u.5   100814115   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 ppo-u.5   7492463   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 ath-u.5   AT2G31290   Ubiquitin carboxyl-terminal hydrolase family protein 
 vvi-u.5   100253756   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 sly-u.5   101265230   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 osa-u.5   4340709   protein WHAT'S THIS FACTOR 1 homolog, chloroplastic 
 zma-u.5   100278528   uncharacterized LOC100278528 

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Top 50 coexpressed genes to 11417849 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11417849 (mtr-u.5 coexpression data)

CoexMap"11417849"


mtrLOC11417849 | Entrez gene ID : 11417849      
Species mtr gma ppo ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 5 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
Protein XP_003592120.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  nucl 1,  pero 1  (predict for XP_003592120.2)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_003592120.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11417849

.
mtr-r.5
for
11417849

.
mtr-u.5
for
11445827

.
mtr-u.5
for
11438267

.
mtr-u.5
for
11413051

.
gma-u.5
for
100814115

.
ppo-u.5
for
7492463

.
ath-u.5
for
AT2G31290

.
vvi-u.5
for
100253756

.
sly-u.5
for
101265230

.
osa-u.5
for
4340709

.
zma-u.5
for
100278528

.


Ortholog ID: 10014
Species ath gma sly osa zma bra vvi ppo mtr mtr tae tae hvu ghi bna bna sbi sot cit bdi nta nta
Symbol AT2G31290 LOC100814115 LOC101265230 LOC4340709 LOC100278528 LOC103868268 LOC100253756 LOC7492463 LOC11413051 LOC11445827 LOC123170334 LOC123150966 LOC123408643 LOC107951623 LOC106425464 LOC106381487 LOC8073178 LOC102590253 LOC102610559 LOC100827622 LOC107816837 LOC107763120
Function* Ubiquitin carboxyl-terminal hydrolase family protein protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic uncharacterized LOC100278528 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1, chloroplastic protein WHAT'S THIS FACTOR 1 homolog, chloroplastic-like protein WHAT'S THIS FACTOR 1 homolog, chloroplastic-like protein ROOT PRIMORDIUM DEFECTIVE 1 protein ROOT PRIMORDIUM DEFECTIVE 1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein WHAT'S THIS FACTOR 1 homolog protein WHAT'S THIS FACTOR 1 homolog, chloroplastic protein ROOT PRIMORDIUM DEFECTIVE 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00600 Sphingolipid metabolism 3
mtr04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00600 Sphingolipid metabolism 3
mtr04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04122 Sulfur relay system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot04144 Endocytosis 2
sot00562 Inositol phosphate metabolism 2
sot04070 Phosphatidylinositol signaling system 2
sot04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00010 Glycolysis / Gluconeogenesis 2
cit01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817686 100814115 101265230 4340709 100278528 103868268 100253756 7492463 11413051 11445827 123170334 123150966 123408643 107951623 106425464 106381487 8073178 102590253 102610559 100827622 107816837 107763120
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