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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11435008   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 mtr-r.5   11435008   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 mtr-m.5   11435008   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 gma-u.5   100788379   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 gma-u.5   100799612   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 ppo-u.5   7483539   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 ath-u.5   EMB3123   PPR containing protein 
 vvi-u.5   100251441   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 sly-u.5   101267975   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 osa-u.5   4324089   protein THYLAKOID ASSEMBLY 8, chloroplastic 
 zma-u.5   542158   thylakoid assembly 8 

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Top 50 coexpressed genes to 11435008 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11435008 (mtr-u.5 coexpression data)

CoexMap"11435008"


mtrLOC11435008 | Entrez gene ID : 11435008      
Species mtr gma ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000373 [list] [network] Group II intron splicing  (7 genes)  IEA  
GO:0009658 [list] [network] chloroplast organization  (62 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003626978.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003626978.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003626978.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11435008
mtr-r.5
for
11435008
mtr-m.5
for
11435008
gma-u.5
for
100788379
gma-u.5
for
100799612
ppo-u.5
for
7483539
ath-u.5
for
EMB3123
vvi-u.5
for
100251441
sly-u.5
for
101267975
osa-u.5
for
4324089
zma-u.5
for
542158


Ortholog ID: 9515
Species mtr gma gma ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC11435008 LOC100799612 LOC100788379 LOC7483539 EMB3123 LOC103863790 LOC100251441 LOC107897493 LOC107914440 LOC106429457 LOC125607898 LOC102622003 LOC101267975 LOC107059800 LOC107790898 LOC107782999 LOC4324089 LOC542158 LOC123065098 LOC123077667 LOC123439584 LOC110434201 LOC100823749
Function* protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic PPR containing protein protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic-like hypothetical protein protein THYLAKOID ASSEMBLY 8, chloroplastic uncharacterized LOC107059800 protein THYLAKOID ASSEMBLY 8, chloroplastic-like protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic thylakoid assembly 8 protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic protein THYLAKOID ASSEMBLY 8, chloroplastic-like pentatricopeptide repeat-containing protein At3g46870 protein THYLAKOID ASSEMBLY 8, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 3
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 3
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bna01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit00071 Fatty acid degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11435008 100799612 100788379 7483539 822397 103863790 100251441 107897493 107914440 106429457 125607898 102622003 101267975 107059800 107790898 107782999 4324089 542158 123065098 123077667 123439584 110434201 100823749
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