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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11436115   KH domain-containing protein HEN4 
 mtr-r.5   11436115   KH domain-containing protein HEN4 
 mtr-m.5   11436115   KH domain-containing protein HEN4 
 gma-u.5   100785136   KH domain-containing protein HEN4 
 gma-u.5   100777433   KH domain-containing protein HEN4 
 ppo-u.5   7467235   KH domain-containing protein HEN4 
 vvi-u.5   100267715   KH domain-containing protein HEN4 
 sly-u.5   101245756   RNA-binding KH domain-containing protein RCF3 
 osa-u.5   4327782   RNA-binding KH domain-containing protein RCF3 
 zma-u.5   100285619   nucleic acid binding protein 

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Top 50 coexpressed genes to 11436115 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11436115 (mtr-u.5 coexpression data)

CoexMap"11436115"


mtrLOC11436115 | Entrez gene ID : 11436115      
Species mtr gma ppo vvi sly osa zma bdi hvu bra cit bna ath sbi ghi sot nta cre tae
Paralog 3 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
Protein XP_003603664.1 [sequence] [blastp]
XP_039688078.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  chlo_mito 4,  mito 1  (predict for XP_003603664.1)
chlo 7,  chlo_mito 4,  mito 1  (predict for XP_039688078.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_003603664.1)
chlo 6  (predict for XP_039688078.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11436115
mtr-r.5
for
11436115
mtr-m.5
for
11436115
gma-u.5
for
100785136
gma-u.5
for
100777433
ppo-u.5
for
7467235
vvi-u.5
for
100267715
sly-u.5
for
101245756
osa-u.5
for
4327782
zma-u.5
for
100285619


Ortholog ID: 12070
Species mtr gma gma ppo vvi ghi ghi cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC11436115 LOC100777433 LOC100785136 LOC7467235 LOC100267715 LOC107930579 LOC107907289 LOC102619376 LOC101245756 LOC102597985 LOC107791404 LOC107774425 LOC4327782 LOC100285619 LOC123077906 LOC123060833 LOC123443288 LOC8078086 LOC100821190 CHLRE_17g707400v5
Function* KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4 RNA-binding KH domain-containing protein RCF3-like RNA-binding KH domain-containing protein RCF3 KH domain-containing protein At4g18375-like RNA-binding KH domain-containing protein RCF3-like RNA-binding KH domain-containing protein RCF3 RNA-binding KH domain-containing protein RCF3 nucleic acid binding protein KH domain-containing protein HEN4 KH domain-containing protein HEN4 KH domain-containing protein HEN4-like KH domain-containing protein HEN4 KH domain-containing protein At4g18375 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 5
gma01230 Biosynthesis of amino acids 4
gma00260 Glycine, serine and threonine metabolism 2
gma00261 Monobactam biosynthesis 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
gma00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 8
ghi03040 Spliceosome 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 8
ghi03040 Spliceosome 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 4
cit03018 RNA degradation 3
cit03013 Nucleocytoplasmic transport 3
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03013 Nucleocytoplasmic transport 4
nta04120 Ubiquitin mediated proteolysis 2
nta03082 ATP-dependent chromatin remodeling 2
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta03050 Proteasome 3
nta03013 Nucleocytoplasmic transport 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03040 Spliceosome 3
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu00970 Aminoacyl-tRNA biosynthesis 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
bdi00310 Lysine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11436115 100777433 100785136 7467235 100267715 107930579 107907289 102619376 101245756 102597985 107791404 107774425 4327782 100285619 123077906 123060833 123443288 8078086 100821190 66056933
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