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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11440827   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 mtr-r.5   11440827   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 gma-u.5   102660808   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 gma-u.5   100799614   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 ppo-u.5   7471174   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 ath-u.5   AT3G25210   Tetratricopeptide repeat (TPR)-like superfamily protein 
 bra-r.6   103828565   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 vvi-u.5   100264218   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 ghi-r.1   121219403   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 ghi-r.1   107953987   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 bna-r.1   106375701   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 bna-r.1   106404130   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 cit-r.1   102614361   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 sly-u.5   101254308   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 sot-r.1   102591141   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 nta-r.1   107762408   pentatricopeptide repeat-containing protein At3g25210, mitochondrial-like 
 nta-r.1   107759243   pentatricopeptide repeat-containing protein At3g25210, mitochondrial-like 
 osa-u.5   9268329   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 zma-u.5   100382549   uncharacterized LOC100382549 
 tae-r.2   123168026   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 tae-r.2   123160244   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 tae-r.2   123150222   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 sbi-r.1   8065421   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 bdi-r.1   100825391   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 

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Top 50 coexpressed genes to 11440827 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11440827 (mtr-u.5 coexpression data)

CoexMap"11440827"


mtrLOC11440827 | Entrez gene ID : 11440827      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae sbi bdi cre hvu
Paralog 2 2 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_024633342.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 5,  chlo_mito 4,  cyto_mito 3,  chlo 2,  nucl 1  (predict for XP_024633342.1)
Subcellular
localization
TargetP
scret 3  (predict for XP_024633342.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11440827
mtr-r.5
for
11440827
gma-u.5
for
102660808
gma-u.5
for
100799614
ppo-u.5
for
7471174
ath-u.5
for
AT3G25210
bra-r.6
for
103828565
vvi-u.5
for
100264218
ghi-r.1
for
121219403
ghi-r.1
for
107953987
bna-r.1
for
106375701
bna-r.1
for
106404130
cit-r.1
for
102614361
sly-u.5
for
101254308
sot-r.1
for
102591141
nta-r.1
for
107762408
nta-r.1
for
107759243
osa-u.5
for
9268329
zma-u.5
for
100382549
tae-r.2
for
123168026
tae-r.2
for
123160244
tae-r.2
for
123150222
sbi-r.1
for
8065421
bdi-r.1
for
100825391


Ortholog ID: 10794
Species mtr gma gma ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae sbi bdi
Symbol LOC11440827 LOC102660808 LOC100799614 LOC7471174 AT3G25210 LOC103828565 LOC100264218 LOC121219403 LOC107953987 LOC106375701 LOC106404130 LOC102614361 LOC101254308 LOC102591141 LOC107762408 LOC107759243 LOC9268329 LOC100382549 LOC123168026 LOC123160244 LOC123150222 LOC8065421 LOC100825391
Function* pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial-like pentatricopeptide repeat-containing protein At3g25210, mitochondrial-like pentatricopeptide repeat-containing protein At3g25210, mitochondrial uncharacterized LOC100382549 pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03015 mRNA surveillance pathway 5
gma03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 5
osa00906 Carotenoid biosynthesis 2
osa00900 Terpenoid backbone biosynthesis 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
tae03013 Nucleocytoplasmic transport 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11440827 102660808 100799614 7471174 822114 103828565 100264218 121219403 107953987 106375701 106404130 102614361 101254308 102591141 107762408 107759243 9268329 100382549 123168026 123160244 123150222 8065421 100825391
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