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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100799614   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 gma-r.7   100799614   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 gma-m.5   100799614   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 gma-u.5   102660808   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 mtr-u.5   11440827   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 ppo-u.5   7471174   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 ath-u.5   AT3G25210   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100264218   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 sly-u.5   101254308   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 osa-u.5   9268329   pentatricopeptide repeat-containing protein At3g25210, mitochondrial 
 zma-u.5   100382549   uncharacterized LOC100382549 

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Top 50 coexpressed genes to 100799614 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100799614 (gma-u.5 coexpression data)

CoexMap"100799614"


gmaLOC100799614 | Entrez gene ID : 100799614      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (563 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003546072.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 3,  chlo 2,  cyto_mito 2,  nucl 1,  cyto 1,  plas 1,  vacu 1,  golg 1,  cysk_nucl 1,  golg_plas 1,  cyto_plas 1  (predict for XP_003546072.1)
Subcellular
localization
TargetP
mito 8,  chlo 3  (predict for XP_003546072.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100799614

.
gma-r.7
for
100799614

.
gma-m.5
for
100799614

.
gma-u.5
for
102660808

.
mtr-u.5
for
11440827

.
ppo-u.5
for
7471174

.
ath-u.5
for
AT3G25210

.
vvi-u.5
for
100264218

.
sly-u.5
for
101254308

.
osa-u.5
for
9268329

.
zma-u.5
for
100382549

.


Ortholog ID: 10794
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G25210 LOC100799614 LOC102660808 LOC101254308 LOC9268329 LOC100382549 LOC103828565 LOC100264218 LOC7471174 LOC11440827 LOC123168026 LOC123150222 LOC107953987 LOC121219403 LOC106375701 LOC106404130 LOC8065421 LOC102591141 LOC102614361 LOC100825391 LOC107759243 LOC107762408
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial uncharacterized LOC100382549 pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial pentatricopeptide repeat-containing protein At3g25210, mitochondrial-like pentatricopeptide repeat-containing protein At3g25210, mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03015 mRNA surveillance pathway 5
gma03250 Viral life cycle - HIV-1 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 5
osa00906 Carotenoid biosynthesis 2
osa00900 Terpenoid backbone biosynthesis 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822114 100799614 102660808 101254308 9268329 100382549 103828565 100264218 7471174 11440827 123168026 123150222 107953987 121219403 106375701 106404130 8065421 102591141 102614361 100825391 107759243 107762408
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