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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   LOJ   LATERAL ORGAN JUNCTION 
 ath-u.5   AT3G54980   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100777321   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 vvi-u.5   100259391   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 ppo-u.5   7495762   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 mtr-u.5   11443262   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 
 sly-u.5   101252311   pentatricopeptide repeat-containing protein At3g54980, mitochondrial 

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Top 50 coexpressed genes to LOJ (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to LOJ (ath-u.5 coexpression data)

CoexMap"121206387"


ghiLOC121206387 | Entrez gene ID : 121206387    
Species ath gma vvi ppo mtr sly sot hvu tae cit sbi zma ghi cre bna nta bdi bra osa
Paralog 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040933223.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 3,  extr 2,  cyto_nucl 2  (predict for XP_040933223.1)
Subcellular
localization
TargetP
other 7  (predict for XP_040933223.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
LOJ

.
ath-u.5
for
AT3G54980

.
gma-u.5
for
100777321

.
vvi-u.5
for
100259391

.
ppo-u.5
for
7495762

.
mtr-u.5
for
11443262

.
sly-u.5
for
101252311

.


Ortholog ID: 12645
Species ath ath gma sly bra vvi ppo mtr ghi bna bna sot cit nta nta
Symbol LOJ AT3G54980 LOC100777321 LOC101252311 LOC103841410 LOC100259391 LOC7495762 LOC11443262 LOC107914253 LOC106412116 LOC106439871 LOC102596962 LOC102609583 LOC107829376 LOC107777250
Function* LATERAL ORGAN JUNCTION Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like pentatricopeptide repeat-containing protein At3g54980, mitochondrial-like uncharacterized LOC107829376 uncharacterized LOC107777250
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818508 824663 100777321 101252311 103841410 100259391 7495762 11443262 107914253 106412116 106439871 102596962 102609583 107829376 107777250
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