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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   121223741   GATA transcription factor 16 
 ghi-r.1   107962878   putative GATA transcription factor 22 
 ath-u.5   GATA20   GATA transcription factor 20 
 ath-u.5   GATA16   GATA transcription factor 16 
 bra-r.6   103849709   GATA transcription factor 15 
 bra-r.6   103859688   GATA transcription factor 17 
 bna-r.1   106446696   GATA transcription factor 17 
 cit-r.1   102629993   GATA transcription factor 16-like 
 gma-u.5   100790571   GATA transcription factor 18 
 gma-u.5   102664611   putative GATA transcription factor 22 
 gma-u.5   100789636   GATA transcription factor 16 
 vvi-u.5   100253375   GATA transcription factor 16 
 ppo-u.5   18107608   putative GATA transcription factor 22 
 ppo-u.5   18101866   GATA transcription factor 15 
 mtr-u.5   25494111   GATA transcription factor 16 
 mtr-u.5   11405635   GATA transcription factor 19 
 mtr-u.5   11417944   GATA transcription factor 18 
 sly-u.5   101268354   putative GATA transcription factor 22 
 sot-r.1   102587834   putative GATA transcription factor 22 
 sot-r.1   102585472   GATA transcription factor 15-like 
 sot-r.1   102584883   GATA transcription factor 23-like 
 nta-r.1   107762304   GATA transcription factor 15 
 nta-r.1   107764238   putative GATA transcription factor 22 
 nta-r.1   107827909   GATA transcription factor 15-like 
 zma-u.5   100284189   uncharacterized LOC100284189 
 zma-u.5   100276694   uncharacterized LOC100276694 
 zma-u.5   100273183   uncharacterized LOC100273183 
 hvu-r.1   123406248   GATA transcription factor 17-like 
 hvu-r.1   123425998   GATA zinc finger domain-containing protein 6-like 
 sbi-r.1   110433298   GATA transcription factor 23-like 
 sbi-r.1   8080199   GATA transcription factor 16 
 bdi-r.1   100837762   GATA transcription factor 16 
 cre-r.1   CHLRE_10g435450v5   uncharacterized protein 
 cre-r.1   CHLRE_07g319701v5   uncharacterized protein 
 cre-r.1   CHLRE_08g358532v5   uncharacterized protein 

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Top 50 coexpressed genes to 121223741 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 121223741 (ghi-r.1 coexpression data)

CoexMap"121223741"


ghiLOC121223741 | Entrez gene ID : 121223741    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta zma hvu sbi bdi cre osa tae
Paralog 2 2 2 1 1 3 1 2 3 1 3 3 3 2 2 1 3 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
GO:0043565 [list] [network] sequence-specific DNA binding  (1947 genes)  IEA  
Protein XP_040961957.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  mito 1  (predict for XP_040961957.1)
Subcellular
localization
TargetP
other 5,  chlo 5  (predict for XP_040961957.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
121223741
ghi-r.1
for
107962878
ath-u.5
for
GATA20
ath-u.5
for
GATA16
bra-r.6
for
103849709
bra-r.6
for
103859688
bna-r.1
for
106446696
cit-r.1
for
102629993
gma-u.5
for
100790571
gma-u.5
for
102664611
gma-u.5
for
100789636
vvi-u.5
for
100253375
ppo-u.5
for
18107608
ppo-u.5
for
18101866
mtr-u.5
for
25494111
mtr-u.5
for
11405635
mtr-u.5
for
11417944
sly-u.5
for
101268354
sot-r.1
for
102587834
sot-r.1
for
102585472
sot-r.1
for
102584883
nta-r.1
for
107762304
nta-r.1
for
107764238
nta-r.1
for
107827909
zma-u.5
for
100284189
zma-u.5
for
100276694
zma-u.5
for
100273183
hvu-r.1
for
123406248
hvu-r.1
for
123425998
sbi-r.1
for
110433298
sbi-r.1
for
8080199
bdi-r.1
for
100837762
cre-r.1
for
CHLRE_10g435450v5
cre-r.1
for
CHLRE_07g319701v5
cre-r.1
for
CHLRE_08g358532v5


Ortholog ID: 206
Species ghi ghi ghi ath ath ath bra bra bna bna cit cit gma gma gma vvi vvi ppo mtr mtr sly sly sot sot nta nta osa osa osa zma zma tae tae hvu sbi sbi bdi bdi bdi cre cre cre
Symbol LOC107933196 LOC107909404 LOC107893291 GATA19 AT4G16141 GATA15 LOC103860826 LOC103869729 LOC106444055 LOC106351111 LOC102629993 LOC102623069 LOC100790571 LOC100527933 LOC100780326 LOC100256170 LOC100247474 LOC7496479 LOC11405635 LOC11417944 LOC101266764 LOC101265416 LOC102604842 LOC102581535 LOC107764238 LOC107778594 LOC4334668 LOC4327810 LOC4326489 LOC100284189 LOC100285453 LOC123180571 LOC123113531 LOC123445761 LOC110433298 LOC8080199 LOC100837762 LOC100845583 LOC100827983 CHLRE_10g435450v5 CHLRE_07g319701v5 CHLRE_08g358532v5
Function* GATA transcription factor 15 GATA transcription factor 18 GATA transcription factor 15 GATA transcription factor 19 GATA type zinc finger transcription factor family protein GATA transcription factor 15 GATA transcription factor 17 GATA transcription factor 17 GATA transcription factor 17 GATA transcription factor 15-like GATA transcription factor 16-like GATA transcription factor 16-like GATA transcription factor 18 uncharacterized LOC100527933 putative GATA transcription factor 22 GATA transcription factor 16 putative GATA transcription factor 22 GATA transcription factor 16 GATA transcription factor 19 GATA transcription factor 18 GATA transcription factor 16 GATA transcription factor 16-like GATA transcription factor 19 GATA transcription factor 16-like putative GATA transcription factor 22 GATA transcription factor 17 GATA transcription factor 16 GATA transcription factor 16 GATA transcription factor 23 uncharacterized LOC100284189 GATA transcription factor 22 GATA transcription factor 17 GATA transcription factor 17 GATA transcription factor 16-like GATA transcription factor 23-like GATA transcription factor 16 GATA transcription factor 16 GATA transcription factor 17 GATA transcription factor 23 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
ath03440 Homologous recombination 3
ath03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00760 Nicotinate and nicotinamide metabolism 4
bna01240 Biosynthesis of cofactors 4
bna00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00196 Photosynthesis - antenna proteins 2
vvi00860 Porphyrin metabolism 2
vvi04120 Ubiquitin mediated proteolysis 2
vvi04712 Circadian rhythm - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 12
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta00760 Nicotinate and nicotinamide metabolism 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
hvu04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 4
bdi03082 ATP-dependent chromatin remodeling 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00531 Glycosaminoglycan degradation 3
bdi00460 Cyanoamino acid metabolism 2
bdi00500 Starch and sucrose metabolism 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
bdi00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107933196 107909404 107893291 829814 827301 819859 103860826 103869729 106444055 106351111 102629993 102623069 100790571 100527933 100780326 100256170 100247474 7496479 11405635 11417944 101266764 101265416 102604842 102581535 107764238 107778594 4334668 4327810 4326489 100284189 100285453 123180571 123113531 123445761 110433298 8080199 100837762 100845583 100827983 5716063 5726572 5729269
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