ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123045117	60S ribosomal protein L13a-4
osa-u.5	4342219	large ribosomal subunit protein uL13y
osa-u.5	4334154	large ribosomal subunit protein uL13w
zma-u.5	100191912	60S ribosomal protein L13a-like
zma-u.5	100283655	60S ribosomal protein L13a
ath-u.5	AT3G07110	Ribosomal protein L13 family protein
ath-u.5	AT3G24830	Ribosomal protein L13 family protein
ath-u.5	AT4G13170	Ribosomal protein L13 family protein
gma-u.5	100808497	60S ribosomal protein L13a-4
gma-u.5	100813340	60S ribosomal protein L13a
gma-u.5	100499978	uncharacterized LOC100499978
sly-u.5	101259442	large ribosomal subunit protein uL13w
sly-u.5	101261552	large ribosomal subunit protein uL13w
sly-u.5	101263197	large ribosomal subunit protein uL13w
vvi-u.5	100267451	60S ribosomal protein L13a-4-like
vvi-u.5	104880402	large ribosomal subunit protein uL13y-like
vvi-u.5	100261957	large ribosomal subunit protein uL13w
ppo-u.5	7461285	60S ribosomal protein L13a-4
ppo-u.5	7471141	60S ribosomal protein L13a-4
ppo-u.5	18095225	60S ribosomal protein L13a-2
mtr-u.5	11414560	60S ribosomal protein L13a-4
mtr-u.5	11429504	60S ribosomal protein L13a-4
mtr-u.5	25498414	60S ribosomal protein L13a-4

Top 50 coexpressed genes to 123045117 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123045117 (tae-r.2 coexpression data)

CoexMap"123045117"

[Cytoscape]

Annotation

functional annotation

KEGG

taes03010 [list] [network] Ribosome (7602 genes)

GO BP

GO:0017148 [list] [network] negative regulation of translation	(152 genes)	IEA
GO:0006412 [list] [network] translation	(1629 genes)	IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(228 genes)	IEA
GO:0005840 [list] [network] ribosome	(1114 genes)	IEA

GO MF

GO:0003729 [list] [network] mRNA binding	(862 genes)	IEA
GO:0003735 [list] [network] structural constituent of ribosome	(1103 genes)	IEA

Protein

XP_044323998.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, mito 3, cyto 2

(predict for XP_044323998.1)

Subcellular
localization
TargetP

mito 2

(predict for XP_044323998.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123045117	osa-u.5 for 4342219	osa-u.5 for 4334154	zma-u.5 for 100191912	zma-u.5 for 100283655	ath-u.5 for AT3G07110	ath-u.5 for AT3G24830	ath-u.5 for AT4G13170	gma-u.5 for 100808497	gma-u.5 for 100813340	gma-u.5 for 100499978	sly-u.5 for 101259442	sly-u.5 for 101261552	sly-u.5 for 101263197	vvi-u.5 for 100267451	vvi-u.5 for 104880402	vvi-u.5 for 100261957	ppo-u.5 for 7461285	ppo-u.5 for 7471141	ppo-u.5 for 18095225	mtr-u.5 for 11414560	mtr-u.5 for 11429504	mtr-u.5 for 25498414

Ortholog

Ortholog ID: 1423

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

60S ribosomal protein L13a-1

60S ribosomal protein L13a-4

60S ribosomal protein L13a-4-like

60S ribosomal protein L13a-4

large ribosomal subunit protein uL13w

large ribosomal subunit protein uL13y

60S ribosomal protein L13a

60S ribosomal protein L13a-like

60S ribosomal protein L13a-4

Ribosomal protein L13 family protein

uncharacterized LOC100499978

60S ribosomal protein L13a

large ribosomal subunit protein uL13w

60S ribosomal protein L13a-2

large ribosomal subunit protein uL13y-like

large ribosomal subunit protein uL13w

60S ribosomal protein L13a-4

60S ribosomal protein L13a-2

60S ribosomal protein L13a-4

60S ribosomal protein L13a-2

60S ribosomal protein L13a-4

large ribosomal subunit protein uL13w

ribosomal protein L13a

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03010	Ribosome	8
tae00260	Glycine, serine and threonine metabolism	3
tae00261	Monobactam biosynthesis	3
tae00270	Cysteine and methionine metabolism	3
tae00300	Lysine biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	17

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	21

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	15

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	18

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	16

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	20

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	19

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	15
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	14

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	20

Expression

Expression pattern

Entrez Gene ID^*

123188847

606336

123426360

123452290

100846133

100845636

4334154

4342219

100283655

100191912

8067456

8085922

826931

822081

100499978

100813340

101263197

101259442

103860259

103838022

104880402

100261957

7471141

18095225

11414560

25498414

107942921

107955241

106434833

106428188

102586211

102587601

102616397

102617059

107824149

107831576

5718550

The preparation time of this page was 0.2 [sec].


Species	tae	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre
Paralog	1	2	2	3	3	3	3	3	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123045117 (tae-r.2 coexpression data)

Top 50 enrichment test to 123045117 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**