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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G07110   Ribosomal protein L13 family protein 
 ath-r.7   AT3G07110   Ribosomal protein L13 family protein 
 ath-m.9   AT3G07110   Ribosomal protein L13 family protein 
 ath-e.2   AT3G07110   Ribosomal protein L13 family protein 
 ath-m.4.bio   AT3G07110   Ribosomal protein L13 family protein 
 ath-m.4.hor   AT3G07110   Ribosomal protein L13 family protein 
 ath-m.4.lig   AT3G07110   Ribosomal protein L13 family protein 
 ath-m.4.str   AT3G07110   Ribosomal protein L13 family protein 
 ath-m.4.tis   AT3G07110   Ribosomal protein L13 family protein 
 ath-u.5   AT3G24830   Ribosomal protein L13 family protein 
 ath-u.5   AT4G13170   Ribosomal protein L13 family protein 
 ath-u.5   AT5G48760   Ribosomal protein L13 family protein 
 bra-r.6   103828595   60S ribosomal protein L13a-2 
 bra-r.6   103837264   60S ribosomal protein L13a-4 
 bra-r.6   103838022   60S ribosomal protein L13a-2 
 bna-r.1   106428188   60S ribosomal protein L13a-4 
 bna-r.1   106403240   60S ribosomal protein L13a-4-like 
 bna-r.1   106348902   60S ribosomal protein L13a-4 
 ghi-r.1   107890486   60S ribosomal protein L13a-4 
 ghi-r.1   107902325   60S ribosomal protein L13a-4 
 ghi-r.1   107908472   60S ribosomal protein L13a-4 
 cit-r.1   102616397   60S ribosomal protein L13a-4 
 cit-r.1   102617059   60S ribosomal protein L13a-4 
 gma-u.5   100527190   uncharacterized LOC100527190 
 gma-u.5   100784830   60S ribosomal protein L13a-4 
 gma-u.5   100808497   60S ribosomal protein L13a-4 
 vvi-u.5   104880402   large ribosomal subunit protein uL13y-like 
 vvi-u.5   100267451   60S ribosomal protein L13a-4-like 
 vvi-u.5   100261957   large ribosomal subunit protein uL13w 
 ppo-u.5   18095225   60S ribosomal protein L13a-2 
 ppo-u.5   7471141   60S ribosomal protein L13a-4 
 ppo-u.5   7461285   60S ribosomal protein L13a-4 
 mtr-u.5   11429504   60S ribosomal protein L13a-4 
 mtr-u.5   25498414   60S ribosomal protein L13a-4 
 mtr-u.5   11414560   60S ribosomal protein L13a-4 
 sly-u.5   101259442   large ribosomal subunit protein uL13w 
 sly-u.5   101263197   large ribosomal subunit protein uL13w 
 sly-u.5   101261552   large ribosomal subunit protein uL13w 
 sot-r.1   102586211   60S ribosomal protein L13a-4 
 sot-r.1   102580700   60S ribosomal protein L13a-4-like 
 sot-r.1   102584826   60S ribosomal protein L13a-4-like 
 nta-r.1   107768819   large ribosomal subunit protein uL13z 
 nta-r.1   107783495   large ribosomal subunit protein uL13w 
 nta-r.1   107798858   large ribosomal subunit protein uL13w 
 osa-u.5   4342219   large ribosomal subunit protein uL13y 
 osa-u.5   4334154   large ribosomal subunit protein uL13w 
 zma-u.5   100283655   60S ribosomal protein L13a 
 zma-u.5   100191912   60S ribosomal protein L13a-like 
 tae-r.2   123045117   60S ribosomal protein L13a-4 
 tae-r.2   123188847   60S ribosomal protein L13a-1 
 tae-r.2   606336   60S ribosomal protein L13a-4 
 hvu-r.1   123452290   60S ribosomal protein L13a-4 
 hvu-r.1   123426360   60S ribosomal protein L13a-4-like 
 sbi-r.1   8067456   60S ribosomal protein L13a-4 
 sbi-r.1   8085922   60S ribosomal protein L13a-4 
 bdi-r.1   100846133   60S ribosomal protein L13a-4 
 bdi-r.1   100845636   60S ribosomal protein L13a-4 
 cre-r.1   CHLRE_12g532550v5   ribosomal protein L13a 

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Top 50 coexpressed genes to AT3G07110 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G07110 (ath-u.5 coexpression data)

CoexMap""


athAT3G07110 | Entrez gene ID : 819897      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 12 3 3 3 2 3 3 3 3 3 3 3 2 2 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function Ribosomal protein L13 family protein
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (124 genes)  HDA  
GO:0022626 [list] [network] cytosolic ribosome  (295 genes)  HDA  
GO:0005730 [list] [network] nucleolus  (394 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005737 [list] [network] cytoplasm  (14000 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  HDA IDA  
Protein NP_001030654.1 [sequence] [blastp]
NP_187367.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  mito 2,  plas 2,  chlo_mito 2,  mito_plas 2  (predict for NP_001030654.1)
cyto 5,  mito 3,  cyto_plas 3  (predict for NP_187367.1)
Subcellular
localization
TargetP
other 4  (predict for NP_001030654.1)
other 4  (predict for NP_187367.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT3G07110
ath-r.7
for
AT3G07110
ath-m.9
for
AT3G07110
ath-e.2
for
AT3G07110
ath-m.4.bio
for
AT3G07110
ath-m.4.hor
for
AT3G07110
ath-m.4.lig
for
AT3G07110
ath-m.4.str
for
AT3G07110
ath-m.4.tis
for
AT3G07110
ath-u.5
for
AT3G24830
ath-u.5
for
AT4G13170
ath-u.5
for
AT5G48760
bra-r.6
for
103828595
bra-r.6
for
103837264
bra-r.6
for
103838022
bna-r.1
for
106428188
bna-r.1
for
106403240
bna-r.1
for
106348902
ghi-r.1
for
107890486
ghi-r.1
for
107902325
ghi-r.1
for
107908472
cit-r.1
for
102616397
cit-r.1
for
102617059
gma-u.5
for
100527190
gma-u.5
for
100784830
gma-u.5
for
100808497
vvi-u.5
for
104880402
vvi-u.5
for
100267451
vvi-u.5
for
100261957
ppo-u.5
for
18095225
ppo-u.5
for
7471141
ppo-u.5
for
7461285
mtr-u.5
for
11429504
mtr-u.5
for
25498414
mtr-u.5
for
11414560
sly-u.5
for
101259442
sly-u.5
for
101263197
sly-u.5
for
101261552
sot-r.1
for
102586211
sot-r.1
for
102580700
sot-r.1
for
102584826
nta-r.1
for
107768819
nta-r.1
for
107783495
nta-r.1
for
107798858
osa-u.5
for
4342219
osa-u.5
for
4334154
zma-u.5
for
100283655
zma-u.5
for
100191912
tae-r.2
for
123045117
tae-r.2
for
123188847
tae-r.2
for
606336
hvu-r.1
for
123452290
hvu-r.1
for
123426360
sbi-r.1
for
8067456
sbi-r.1
for
8085922
bdi-r.1
for
100846133
bdi-r.1
for
100845636
cre-r.1
for
CHLRE_12g532550v5

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Ortholog ID: 1423
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol AT3G24830 AT4G13170 AT5G48760 LOC103837264 LOC103838022 LOC103860259 LOC106428188 LOC106434833 LOC106447399 LOC107890486 LOC107955241 LOC107942921 LOC102616397 LOC102617059 LOC100808497 LOC100813340 LOC100499978 LOC104880402 LOC100267451 LOC100261957 LOC18095225 LOC7471141 LOC7461285 LOC11429504 LOC25498414 LOC11414560 LOC101259442 LOC101263197 LOC101261552 LOC102586211 LOC102580700 LOC102587601 LOC107783495 LOC107824149 LOC107831576 LOC4342219 LOC4334154 LOC100283655 LOC100191912 LOC123188847 LOC606336 LOC123113362 LOC123452290 LOC123426360 LOC8067456 LOC8085922 LOC100846133 LOC100845636 CHLRE_12g532550v5
Function* Ribosomal protein L13 family protein Ribosomal protein L13 family protein Ribosomal protein L13 family protein 60S ribosomal protein L13a-4 60S ribosomal protein L13a-2 60S ribosomal protein L13a-2 60S ribosomal protein L13a-4 60S ribosomal protein L13a-2 60S ribosomal protein L13a-2 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a uncharacterized LOC100499978 large ribosomal subunit protein uL13y-like 60S ribosomal protein L13a-4-like large ribosomal subunit protein uL13w 60S ribosomal protein L13a-2 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 large ribosomal subunit protein uL13w large ribosomal subunit protein uL13w large ribosomal subunit protein uL13w 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4-like 60S ribosomal protein L13a-4 large ribosomal subunit protein uL13w large ribosomal subunit protein uL13w large ribosomal subunit protein uL13w large ribosomal subunit protein uL13y large ribosomal subunit protein uL13w 60S ribosomal protein L13a 60S ribosomal protein L13a-like 60S ribosomal protein L13a-1 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4-like 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 60S ribosomal protein L13a-4 ribosomal protein L13a
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae00260 Glycine, serine and threonine metabolism 3
tae00261 Monobactam biosynthesis 3
tae00270 Cysteine and methionine metabolism 3
tae00300 Lysine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 20
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822081 826931 834934 103837264 103838022 103860259 106428188 106434833 106447399 107890486 107955241 107942921 102616397 102617059 100808497 100813340 100499978 104880402 100267451 100261957 18095225 7471141 7461285 11429504 25498414 11414560 101259442 101263197 101261552 102586211 102580700 102587601 107783495 107824149 107831576 4342219 4334154 100283655 100191912 123188847 606336 123113362 123452290 123426360 8067456 8085922 100846133 100845636 5718550
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