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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123052231   pentatricopeptide repeat-containing protein At5g02860 
 tae-r.2   123188170   pentatricopeptide repeat-containing protein At5g02860-like 
 tae-r.2   123044357   pentatricopeptide repeat-containing protein At5g02860 
 hvu-r.1   123425479   pentatricopeptide repeat-containing protein At5g02860 
 bdi-r.1   100828364   pentatricopeptide repeat-containing protein At5g02860 
 osa-u.5   4343774   pentatricopeptide repeat-containing protein At5g02860 
 zma-u.5   103633383   pentatricopeptide repeat-containing protein 
 sbi-r.1   8078985   pentatricopeptide repeat-containing protein At5g02860 
 ath-u.5   AT5G02860   Pentatricopeptide repeat (PPR) superfamily protein 
 gma-u.5   100813079   pentatricopeptide repeat-containing protein At5g02860 
 gma-u.5   100796014   pentatricopeptide repeat-containing protein At5g02860 
 sly-u.5   101245210   pentatricopeptide repeat-containing protein 
 bra-r.6   103833941   pentatricopeptide repeat-containing protein At5g02860 
 vvi-u.5   100257649   pentatricopeptide repeat-containing protein At5g02860 
 ppo-u.5   7478722   pentatricopeptide repeat-containing protein At5g02860 
 ppo-u.5   7478642   pentatricopeptide repeat-containing protein At5g02860 
 mtr-u.5   25488998   pentatricopeptide repeat-containing protein At5g02860 
 ghi-r.1   107908856   pentatricopeptide repeat-containing protein At5g02860 
 ghi-r.1   107907719   pentatricopeptide repeat-containing protein At5g02860 
 bna-r.1   106360937   pentatricopeptide repeat-containing protein At5g02860 
 bna-r.1   111207868   pentatricopeptide repeat-containing protein At5g02860 
 sot-r.1   102593457   pentatricopeptide repeat-containing protein At5g02860 
 cit-r.1   102617122   pentatricopeptide repeat-containing protein At5g02860 
 nta-r.1   107768112   uncharacterized LOC107768112 
 nta-r.1   107771589   uncharacterized LOC107771589 

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Top 50 coexpressed genes to 123052231 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123052231 (tae-r.2 coexpression data)

CoexMap"123052231"


taeLOC123052231 | Entrez gene ID : 123052231    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 2 1 1 1 2 1 2 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044331292.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  cyto_mito 1  (predict for XP_044331292.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_044331292.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123052231
tae-r.2
for
123188170
tae-r.2
for
123044357
hvu-r.1
for
123425479
bdi-r.1
for
100828364
osa-u.5
for
4343774
zma-u.5
for
103633383
sbi-r.1
for
8078985
ath-u.5
for
AT5G02860
gma-u.5
for
100813079
gma-u.5
for
100796014
sly-u.5
for
101245210
bra-r.6
for
103833941
vvi-u.5
for
100257649
ppo-u.5
for
7478722
ppo-u.5
for
7478642
mtr-u.5
for
25488998
ghi-r.1
for
107908856
ghi-r.1
for
107907719
bna-r.1
for
106360937
bna-r.1
for
111207868
sot-r.1
for
102593457
cit-r.1
for
102617122
nta-r.1
for
107768112
nta-r.1
for
107771589


Ortholog ID: 10307
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123052231 LOC123188170 LOC123044357 LOC123425479 LOC100828364 LOC4343774 LOC103633383 LOC8078985 AT5G02860 LOC100813079 LOC100796014 LOC101245210 LOC103833941 LOC100257649 LOC7478722 LOC7478642 LOC25488998 LOC107908856 LOC107907719 LOC106360937 LOC111207868 LOC102593457 LOC102617122 LOC107768112 LOC107771589
Function* pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860-like pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g02860 Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 pentatricopeptide repeat-containing protein At5g02860 uncharacterized LOC107768112 uncharacterized LOC107771589
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 3
gma00500 Starch and sucrose metabolism 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot00920 Sulfur metabolism 3
sot03040 Spliceosome 2
sot00270 Cysteine and methionine metabolism 2
sot00543 Exopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123052231 123188170 123044357 123425479 100828364 4343774 103633383 8078985 831761 100813079 100796014 101245210 103833941 100257649 7478722 7478642 25488998 107908856 107907719 106360937 111207868 102593457 102617122 107768112 107771589
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