ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123054849	uncharacterized LOC123054849
tae-r.2	123047017	uncharacterized LOC123047017
tae-r.2	123190691	uncharacterized LOC123190691
hvu-r.1	123428071	uncharacterized LOC123428071
bdi-r.1	100844231	uncharacterized LOC100844231
osa-u.5	4337266	uncharacterized LOC4337266
zma-u.5	100275576	uncharacterized LOC100275576
zma-u.5	103645818	uncharacterized LOC103645818
sbi-r.1	8070257	uncharacterized LOC8070257
ath-u.5	AT2G24530	transcriptional regulator of RNA polII, SAGA, subunit
ath-u.5	AT4G31440	transcriptional regulator of RNA polII, SAGA, subunit
gma-u.5	100803746	uncharacterized LOC100803746
gma-u.5	100799736	uncharacterized LOC100799736
sly-u.5	101254809	uncharacterized LOC101254809
sly-u.5	101249541	uncharacterized LOC101249541
bra-r.6	103834610	uncharacterized LOC103834610
bra-r.6	103842250	uncharacterized LOC103842250
bra-r.6	103851844	uncharacterized LOC103851844
vvi-u.5	104880381	uncharacterized LOC104880381
vvi-u.5	100852560	uncharacterized LOC100852560
ppo-u.5	7461331	uncharacterized LOC7461331
ppo-u.5	7476672	uncharacterized LOC7476672
ppo-u.5	7476802	uncharacterized LOC7476802
mtr-u.5	11425686	uncharacterized LOC11425686
mtr-u.5	120579462	uncharacterized LOC120579462
ghi-r.1	107932990	uncharacterized LOC107932990
ghi-r.1	107906774	uncharacterized LOC107906774
ghi-r.1	107906017	uncharacterized LOC107906017
bna-r.1	BNAA09G41350D	uncharacterized BNAA09G41350D
bna-r.1	106375418	uncharacterized LOC106375418
sot-r.1	102582380	uncharacterized LOC102582380
sot-r.1	102594722	uncharacterized LOC102594722
cit-r.1	102628352	uncharacterized LOC102628352
cit-r.1	107174604	uncharacterized LOC107174604
nta-r.1	107815264	uncharacterized LOC107815264
nta-r.1	107809335	uncharacterized LOC107809335
nta-r.1	107792395	uncharacterized LOC107792395

Annotation

functional annotation

KEGG

GO BP

GO:0006357 [list] [network] regulation of transcription by RNA polymerase II

(1094 genes)

IEA

GO CC

GO:0000124 [list] [network] SAGA complex

(69 genes)

IEA

GO MF

GO:0003713 [list] [network] transcription coactivator activity

(111 genes)

IEA

Protein

XP_044334650.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto 1

(predict for XP_044334650.1)

Subcellular
localization
TargetP

other 7

(predict for XP_044334650.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123054849	tae-r.2 for 123047017	tae-r.2 for 123190691	hvu-r.1 for 123428071	bdi-r.1 for 100844231	osa-u.5 for 4337266	zma-u.5 for 100275576	zma-u.5 for 103645818	sbi-r.1 for 8070257	ath-u.5 for AT2G24530	ath-u.5 for AT4G31440	gma-u.5 for 100803746	gma-u.5 for 100799736	sly-u.5 for 101254809	sly-u.5 for 101249541	bra-r.6 for 103834610	bra-r.6 for 103842250	bra-r.6 for 103851844	vvi-u.5 for 104880381	vvi-u.5 for 100852560	ppo-u.5 for 7461331	ppo-u.5 for 7476672	ppo-u.5 for 7476802	mtr-u.5 for 11425686	mtr-u.5 for 120579462	ghi-r.1 for 107932990	ghi-r.1 for 107906774	ghi-r.1 for 107906017	bna-r.1 for BNAA09G41350D	bna-r.1 for 106375418	sot-r.1 for 102582380	sot-r.1 for 102594722	cit-r.1 for 102628352	cit-r.1 for 107174604	nta-r.1 for 107815264	nta-r.1 for 107809335	nta-r.1 for 107792395

Ortholog

Ortholog ID: 3201

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

uncharacterized LOC123054849

uncharacterized LOC123047017

uncharacterized LOC123190691

uncharacterized LOC123428071

uncharacterized LOC100844231

uncharacterized LOC4337266

uncharacterized LOC100275576

uncharacterized LOC103645818

uncharacterized LOC8070257

transcriptional regulator of RNA polII, SAGA, subunit

uncharacterized LOC100803746

uncharacterized LOC100811524

uncharacterized LOC101254809

uncharacterized LOC101249541

uncharacterized LOC103842250

uncharacterized LOC103851844

uncharacterized LOC104880381

uncharacterized LOC100852560

uncharacterized LOC7476672

uncharacterized LOC7476802

uncharacterized LOC18100755

uncharacterized LOC11425686

uncharacterized LOC120579462

uncharacterized LOC107932990

uncharacterized LOC107902018

uncharacterized LOC107958329

uncharacterized BNAC03G67600D

uncharacterized LOC102582380

uncharacterized LOC102594722

uncharacterized LOC102628352

uncharacterized LOC107174604

uncharacterized LOC107815264

uncharacterized LOC107809335

uncharacterized LOC107792395

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	3
ath03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03083	Polycomb repressive complex	3
bra03250	Viral life cycle - HIV-1	3
bra03040	Spliceosome	2
bra03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03083	Polycomb repressive complex	2
bra03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	3
vvi03082	ATP-dependent chromatin remodeling	2
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03083	Polycomb repressive complex	2
ghi00270	Cysteine and methionine metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	5
sot00195	Photosynthesis	3
sot03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	2
nta03040	Spliceosome	2
nta00561	Glycerolipid metabolism	2
nta00564	Glycerophospholipid metabolism	2
nta04070	Phosphatidylinositol signaling system	2

Expression

Expression pattern

Entrez Gene ID^*

123054849

123047017

123190691

123428071

100844231

4337266

100275576

103645818

8070257

816989

829271

100803746

100811524

101254809

101249541

103842250

103851844

104880381

100852560

7476672

7476802

18100755

11425686

120579462

107932990

107902018

107958329

106390045

102582380

102594722

102628352

107174604

107815264

107809335

107792395

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123054849 (tae-r.2 coexpression data)

Top 50 enrichment test to 123054849 (tae-r.2 coexpression data)


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	1	1	1	2	1	2	2	2	3	2	3	2	3	2	2	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123054849 (tae-r.2 coexpression data)

Top 50 enrichment test to 123054849 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**