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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123071888   endoribonuclease Dicer homolog 3a 
 tae-r.2   123093773   endoribonuclease Dicer homolog 1 
 tae-r.2   123119635   endoribonuclease Dicer homolog 2a 
 hvu-r.1   123452624   endoribonuclease Dicer homolog 2a 
 hvu-r.1   123449883   endoribonuclease Dicer homolog 1 
 hvu-r.1   123445161   endoribonuclease Dicer homolog 3a 
 bdi-r.1   100842689   endoribonuclease Dicer homolog 1 
 bdi-r.1   100839791   endoribonuclease Dicer homolog 4 
 bdi-r.1   100838800   endoribonuclease Dicer homolog 3b 
 osa-u.5   107282071   endoribonuclease Dicer homolog 3a-like 
 osa-u.5   4346696   endoribonuclease Dicer homolog 2b-like 
 zma-u.5   100192986   dicer-like 105 
 zma-u.5   103626078   endoribonuclease Dicer homolog 2a 
 zma-u.5   100381550   uncharacterized LOC100381550 
 sbi-r.1   8067129   endoribonuclease Dicer homolog 3b 
 sbi-r.1   8077972   endoribonuclease Dicer homolog 1 
 sbi-r.1   8064459   endoribonuclease Dicer homolog 4 
 ath-u.5   DCL2   dicer-like 2 
 ath-u.5   DCL3   dicer-like 3 
 ath-u.5   DCL4   dicer-like 4 
 gma-u.5   100816164   endoribonuclease Dicer homolog 2 
 gma-u.5   100814732   endoribonuclease Dicer homolog 3a 
 gma-u.5   100811631   endoribonuclease Dicer homolog 1 
 sly-u.5   DCL3   endoribonuclease Dicer homolog 3a 
 sly-u.5   DCL1   endoribonuclease Dicer homolog 1 
 sly-u.5   DCL2b   endoribonuclease Dicer 2b 
 bra-r.6   103855153   endoribonuclease Dicer homolog 2 
 bra-r.6   103844613   endoribonuclease Dicer homolog 1 
 bra-r.6   103873620   endoribonuclease Dicer homolog 3 
 vvi-u.5   100254311   endoribonuclease Dicer homolog 3a 
 vvi-u.5   100258190   endoribonuclease Dicer homolog 2 
 vvi-u.5   100264308   endoribonuclease Dicer homolog 1 
 ppo-u.5   7463776   endoribonuclease Dicer homolog 3 
 ppo-u.5   7474402   endoribonuclease Dicer homolog 2 
 ppo-u.5   7479544   dicer-like protein 4 
 mtr-u.5   25483869   endoribonuclease Dicer homolog 2 
 mtr-u.5   25493973   dicer-like protein 4 
 mtr-u.5   25501509   endoribonuclease Dicer homolog 2 
 ghi-r.1   107940856   dicer-like protein 4 
 ghi-r.1   107954417   endoribonuclease Dicer homolog 1 
 ghi-r.1   107961631   endoribonuclease Dicer homolog 3a 
 bna-r.1   111211877   endoribonuclease Dicer homolog 2-like 
 bna-r.1   106450530   endoribonuclease Dicer homolog 2-like 
 bna-r.1   106439495   dicer-like protein 4 
 sot-r.1   102580979   endoribonuclease Dicer homolog 2-like 
 sot-r.1   102587620   endoribonuclease Dicer homolog 2-like 
 sot-r.1   102595284   endoribonuclease Dicer homolog 3a 
 cit-r.1   102629634   endoribonuclease Dicer homolog 1 
 cit-r.1   102624402   endoribonuclease Dicer homolog 3 
 cit-r.1   102621372   dicer-like protein 4 
 nta-r.1   107777140   endoribonuclease Dicer homolog 2 
 nta-r.1   107804767   dicer-like protein 4 
 nta-r.1   107802922   endoribonuclease Dicer homolog 2 
 cre-r.1   CHLRE_07g345900v5   uncharacterized protein 
 cre-r.1   CHLRE_16g695200v5   uncharacterized protein 
 cre-r.1   CHLRE_02g141000v5   uncharacterized protein 

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Top 50 coexpressed genes to 123071888 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123071888 (tae-r.2 coexpression data)

CoexMap"123071888"


taeLOC123071888 | Entrez gene ID : 123071888    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 3 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0030422 [list] [network] siRNA processing  (53 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (13575 genes)  IEA  
GO MF
GO:0004525 [list] [network] ribonuclease III activity  (42 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (7858 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044351392.1 [sequence] [blastp]
XP_044351393.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for XP_044351392.1)
cyto 6,  nucl 4  (predict for XP_044351393.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_044351392.1)
other 8,  chlo 3  (predict for XP_044351393.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123071888
tae-r.2
for
123093773
tae-r.2
for
123119635
hvu-r.1
for
123452624
hvu-r.1
for
123449883
hvu-r.1
for
123445161
bdi-r.1
for
100842689
bdi-r.1
for
100839791
bdi-r.1
for
100838800
osa-u.5
for
107282071
osa-u.5
for
4346696
zma-u.5
for
100192986
zma-u.5
for
103626078
zma-u.5
for
100381550
sbi-r.1
for
8067129
sbi-r.1
for
8077972
sbi-r.1
for
8064459
ath-u.5
for
DCL2
ath-u.5
for
DCL3
ath-u.5
for
DCL4
gma-u.5
for
100816164
gma-u.5
for
100814732
gma-u.5
for
100811631
sly-u.5
for
DCL3
sly-u.5
for
DCL1
sly-u.5
for
DCL2b
bra-r.6
for
103855153
bra-r.6
for
103844613
bra-r.6
for
103873620
vvi-u.5
for
100254311
vvi-u.5
for
100258190
vvi-u.5
for
100264308
ppo-u.5
for
7463776
ppo-u.5
for
7474402
ppo-u.5
for
7479544
mtr-u.5
for
25483869
mtr-u.5
for
25493973
mtr-u.5
for
25501509
ghi-r.1
for
107940856
ghi-r.1
for
107954417
ghi-r.1
for
107961631
bna-r.1
for
111211877
bna-r.1
for
106450530
bna-r.1
for
106439495
sot-r.1
for
102580979
sot-r.1
for
102587620
sot-r.1
for
102595284
cit-r.1
for
102629634
cit-r.1
for
102624402
cit-r.1
for
102621372
nta-r.1
for
107777140
nta-r.1
for
107804767
nta-r.1
for
107802922
cre-r.1
for
CHLRE_07g345900v5
cre-r.1
for
CHLRE_16g695200v5
cre-r.1
for
CHLRE_02g141000v5


Ortholog ID: 537
Species tae tae tae hvu hvu bdi bdi bdi osa osa osa zma zma zma sbi sbi sbi ath ath ath gma gma gma sly sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit cit nta nta nta cre cre cre
Symbol LOC123093773 LOC123119635 LOC123080209 LOC123449883 LOC123431733 LOC100839791 LOC100824131 LOC100836134 LOC4348944 LOC4333337 LOC4324864 LOC103626078 LOC100381550 LOC103643440 LOC8067129 LOC8064552 LOC8064553 DCL2 DCL4 DCL1 LOC100816164 LOC100796706 LOC100818702 DCL3 DCL1 DCL2b LOC103855153 LOC103844613 LOC103845687 LOC100254311 LOC100258190 LOC100264308 LOC7463776 LOC7462112 LOC18096402 LOC25501509 LOC11431448 LOC11436582 LOC107961631 LOC107943956 LOC107890465 LOC106450530 LOC106439495 LOC106355731 LOC102597432 LOC102601788 LOC102580326 LOC102629634 LOC102624402 LOC102617691 LOC107802922 LOC107829523 LOC107824932 CHLRE_07g345900v5 CHLRE_16g695200v5 CHLRE_02g141000v5
Function* endoribonuclease Dicer homolog 1 endoribonuclease Dicer homolog 2a endoribonuclease Dicer homolog 3a endoribonuclease Dicer homolog 1 endoribonuclease Dicer homolog 3b-like endoribonuclease Dicer homolog 4 endoribonuclease Dicer homolog 2a endoribonuclease Dicer homolog 3a endoribonuclease Dicer homolog 3b endoribonuclease Dicer homolog 2a-like endoribonuclease Dicer homolog 3a-like endoribonuclease Dicer homolog 2a uncharacterized LOC100381550 endoribonuclease Dicer homolog 3b endoribonuclease Dicer homolog 3b endoribonuclease Dicer homolog 2a endoribonuclease Dicer homolog 2a dicer-like 2 dicer-like 4 dicer-like 1 endoribonuclease Dicer homolog 2 endoribonuclease Dicer homolog 2 dicer-like protein 4 endoribonuclease Dicer homolog 3a endoribonuclease Dicer homolog 1 endoribonuclease Dicer 2b endoribonuclease Dicer homolog 2 endoribonuclease Dicer homolog 1 dicer-like protein 4 endoribonuclease Dicer homolog 3a endoribonuclease Dicer homolog 2 endoribonuclease Dicer homolog 1 endoribonuclease Dicer homolog 3 endoribonuclease Dicer homolog 2 endoribonuclease Dicer homolog 1 endoribonuclease Dicer homolog 2 endoribonuclease Dicer homolog 1 endoribonuclease Dicer homolog 3a endoribonuclease Dicer homolog 3a endoribonuclease Dicer homolog 2 dicer-like protein 4 endoribonuclease Dicer homolog 2-like dicer-like protein 4 endoribonuclease Dicer homolog 3 endoribonuclease Dicer homolog 1 dicer-like protein 4 endoribonuclease Dicer homolog 2-like endoribonuclease Dicer homolog 1 endoribonuclease Dicer homolog 3 endoribonuclease Dicer homolog 2 endoribonuclease Dicer homolog 2 endoribonuclease Dicer homolog 3a endoribonuclease Dicer homolog 3a-like uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03040 Spliceosome 6
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 6
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 3
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03015 mRNA surveillance pathway 2
bdi03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa04141 Protein processing in endoplasmic reticulum 3
osa00510 N-Glycan biosynthesis 2
osa00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03440 Homologous recombination 2
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04141 Protein processing in endoplasmic reticulum 3
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
bra04136 Autophagy - other 2
bra04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 2
ppo03082 ATP-dependent chromatin remodeling 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00310 Lysine degradation 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi04518 Integrin signaling 3
ghi04142 Lysosome 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
ghi04518 Integrin signaling 2
ghi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 6
bna03082 ATP-dependent chromatin remodeling 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 9
cit03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04146 Peroxisome 7
cre00071 Fatty acid degradation 6
cre01212 Fatty acid metabolism 6
cre01200 Carbon metabolism 5
cre00592 alpha-Linolenic acid metabolism 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123093773 123119635 123080209 123449883 123431733 100839791 100824131 100836134 4348944 4333337 4324864 103626078 100381550 103643440 8067129 8064552 8064553 821300 832154 839574 100816164 100796706 100818702 101265460 101260085 101256737 103855153 103844613 103845687 100254311 100258190 100264308 7463776 7462112 18096402 25501509 11431448 11436582 107961631 107943956 107890465 106450530 106439495 106355731 102597432 102601788 102580326 102629634 102624402 102617691 107802922 107829523 107824932 5718140 66056850 5720424
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