Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123079535   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 osa-u.5   4327598   putative pentatricopeptide repeat-containing protein At5g40405 
 zma-u.5   100382299   Pentatricopeptide repeat-containing protein chloroplastic/mitochondrial 
 sly-u.5   101259694   putative pentatricopeptide repeat-containing protein At5g40405 
 vvi-u.5   100243474   pentatricopeptide repeat-containing protein At4g21065 

close


Top 50 coexpressed genes to 123079535 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 123079535 (tae-r.2 coexpression data)

CoexMap"123079535"


taeLOC123079535 | Entrez gene ID : 123079535    
Species tae osa zma sly vvi hvu cit bra ghi ppo mtr sbi ath bdi nta gma bna cre sot
Paralog 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2838 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044358244.1 [sequence] [blastp]
XP_044358245.1 [sequence] [blastp]
XP_044358246.1 [sequence] [blastp]
XP_044358247.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 3,  nucl 1,  chlo_mito 1  (predict for XP_044358244.1)
cyto 5,  chlo 3,  nucl 1,  chlo_mito 1  (predict for XP_044358245.1)
cyto 5,  chlo 3,  nucl 1,  chlo_mito 1  (predict for XP_044358246.1)
cyto 5,  chlo 3,  nucl 1,  chlo_mito 1  (predict for XP_044358247.1)
Subcellular
localization
TargetP
other 3  (predict for XP_044358244.1)
other 3  (predict for XP_044358245.1)
other 3  (predict for XP_044358246.1)
other 3  (predict for XP_044358247.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123079535
osa-u.5
for
4327598
zma-u.5
for
100382299
sly-u.5
for
101259694
vvi-u.5
for
100243474


Ortholog ID: 13524
Species tae hvu bdi osa zma sbi sly vvi ghi ghi sot nta nta
Symbol LOC123079535 LOC123444682 LOC100830300 LOC4327598 LOC100382299 LOC8085381 LOC101259694 LOC100243474 LOC121220898 LOC107891294 LOC102589457 LOC107788068 LOC107800899
Function* pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like pentatricopeptide repeat-containing protein At2g02980, chloroplastic putative pentatricopeptide repeat-containing protein At5g40405 Pentatricopeptide repeat-containing protein chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At2g02980, chloroplastic putative pentatricopeptide repeat-containing protein At5g40405 pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial putative pentatricopeptide repeat-containing protein At5g40405 pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like putative pentatricopeptide repeat-containing protein At5g40405
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03040 Spliceosome 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123079535 123444682 100830300 4327598 100382299 8085381 101259694 100243474 121220898 107891294 102589457 107788068 107800899
The preparation time of this page was 0.2 [sec].