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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8085381   pentatricopeptide repeat-containing protein At2g02980, chloroplastic 
 zma-u.5   100382299   Pentatricopeptide repeat-containing protein chloroplastic/mitochondrial 
 osa-u.5   4327598   putative pentatricopeptide repeat-containing protein At5g40405 
 sly-u.5   101259694   putative pentatricopeptide repeat-containing protein At5g40405 
 vvi-u.5   100243474   pentatricopeptide repeat-containing protein At4g21065 

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Top 50 coexpressed genes to 8085381 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8085381 (sbi-r.1 coexpression data)

CoexMap"8085381"


sbiLOC8085381 | Entrez gene ID : 8085381    
Species sbi zma osa sly vvi bra nta mtr cre hvu cit bdi ppo sot tae ath bna ghi gma
Paralog 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (378 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (824 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1243 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002456526.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 1,  mito 1,  pero 1  (predict for XP_002456526.2)
Subcellular
localization
TargetP
mito 3,  other 3  (predict for XP_002456526.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8085381

.
zma-u.5
for
100382299

.
osa-u.5
for
4327598

.
sly-u.5
for
101259694

.
vvi-u.5
for
100243474

.


Ortholog ID: 13524
Species sly osa zma vvi tae hvu ghi ghi sbi sot bdi nta nta
Symbol LOC101259694 LOC4327598 LOC100382299 LOC100243474 LOC123079535 LOC123444682 LOC121220898 LOC107891294 LOC8085381 LOC102589457 LOC100830300 LOC107788068 LOC107800899
Function* putative pentatricopeptide repeat-containing protein At5g40405 putative pentatricopeptide repeat-containing protein At5g40405 Pentatricopeptide repeat-containing protein chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At4g21065 pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At1g59720, chloroplastic/mitochondrial pentatricopeptide repeat-containing protein At2g02980, chloroplastic putative pentatricopeptide repeat-containing protein At5g40405 pentatricopeptide repeat-containing protein At2g02980, chloroplastic pentatricopeptide repeat-containing protein At2g02980, chloroplastic-like putative pentatricopeptide repeat-containing protein At5g40405
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03040 Spliceosome 3
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101259694 4327598 100382299 100243474 123079535 123444682 121220898 107891294 8085381 102589457 100830300 107788068 107800899
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