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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123086933   pentatricopeptide repeat-containing protein At4g31850, chloroplastic-like 
 osa-u.5   4348654   pentatricopeptide repeat-containing protein At4g31850, chloroplastic 
 zma-u.5   103639062   pentatricopeptide repeat-containing protein At4g31850, chloroplastic 
 ath-u.5   PGR3   proton gradient regulation 3 
 gma-u.5   100778358   pentatricopeptide repeat-containing protein At4g31850, chloroplastic 
 sly-u.5   101253773   pentatricopeptide repeat-containing protein At4g31850, chloroplastic 
 vvi-u.5   100247529   pentatricopeptide repeat-containing protein At4g31850, chloroplastic 
 mtr-u.5   11431942   pentatricopeptide repeat-containing protein At4g31850, chloroplastic 

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Top 50 coexpressed genes to 123086933 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123086933 (tae-r.2 coexpression data)

CoexMap"123086933"


taeLOC123086933 | Entrez gene ID : 123086933    
Species tae osa zma ath gma sly vvi mtr bdi hvu bra cit bna ppo sbi ghi sot nta cre
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044364733.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_044364733.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_044364733.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123086933
osa-u.5
for
4348654
zma-u.5
for
103639062
ath-u.5
for
PGR3
gma-u.5
for
100778358
sly-u.5
for
101253773
vvi-u.5
for
100247529
mtr-u.5
for
11431942


Ortholog ID: 9618
Species tae tae hvu bdi osa zma sbi ath gma sly bra bra vvi mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123086933 LOC123091044 LOC123447713 LOC100836501 LOC4348654 LOC103639062 LOC8066277 PGR3 LOC100778358 LOC101253773 LOC103854849 LOC103862089 LOC100247529 LOC11431942 LOC107906817 LOC107958979 LOC106423362 LOC106372436 LOC102586286 LOC102631179 LOC107805778 LOC107795365
Function* pentatricopeptide repeat-containing protein At4g31850, chloroplastic-like pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic proton gradient regulation 3 pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic-like pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic uncharacterized LOC107805778 uncharacterized LOC107795365
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 3
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123086933 123091044 123447713 100836501 4348654 103639062 8066277 829314 100778358 101253773 103854849 103862089 100247529 11431942 107906817 107958979 106423362 106372436 102586286 102631179 107805778 107795365
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