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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8066277   pentatricopeptide repeat-containing protein At4g31850, chloroplastic 
 zma-u.5   103639062   pentatricopeptide repeat-containing protein At4g31850, chloroplastic 
 osa-u.5   4348654   pentatricopeptide repeat-containing protein At4g31850, chloroplastic 
 ath-u.5   PGR3   proton gradient regulation 3 
 gma-u.5   100778358   pentatricopeptide repeat-containing protein At4g31850, chloroplastic 
 sly-u.5   101253773   pentatricopeptide repeat-containing protein At4g31850, chloroplastic 
 vvi-u.5   100247529   pentatricopeptide repeat-containing protein At4g31850, chloroplastic 
 mtr-u.5   11431942   pentatricopeptide repeat-containing protein At4g31850, chloroplastic 

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Top 50 coexpressed genes to 8066277 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8066277 (sbi-r.1 coexpression data)

CoexMap"8066277"


sbiLOC8066277 | Entrez gene ID : 8066277    
Species sbi zma osa ath gma sly vvi mtr bra nta cre hvu cit bdi ppo sot tae bna ghi
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_021307171.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_021307171.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_021307171.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8066277

.
zma-u.5
for
103639062

.
osa-u.5
for
4348654

.
ath-u.5
for
PGR3

.
gma-u.5
for
100778358

.
sly-u.5
for
101253773

.
vvi-u.5
for
100247529

.
mtr-u.5
for
11431942

.


Ortholog ID: 9618
Species ath gma sly osa zma bra bra vvi mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol PGR3 LOC100778358 LOC101253773 LOC4348654 LOC103639062 LOC103854849 LOC103862089 LOC100247529 LOC11431942 LOC123086933 LOC123091044 LOC123447713 LOC107906817 LOC107958979 LOC106423362 LOC106372436 LOC8066277 LOC102586286 LOC102631179 LOC100836501 LOC107805778 LOC107795365
Function* proton gradient regulation 3 pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic-like pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic-like pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic pentatricopeptide repeat-containing protein At4g31850, chloroplastic uncharacterized LOC107805778 uncharacterized LOC107795365
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 3
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829314 100778358 101253773 4348654 103639062 103854849 103862089 100247529 11431942 123086933 123091044 123447713 107906817 107958979 106423362 106372436 8066277 102586286 102631179 100836501 107805778 107795365
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