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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123087085   pentatricopeptide repeat-containing protein At2g37230 
 tae-r.2   123047479   pentatricopeptide repeat-containing protein At2g37230 
 tae-r.2   123090880   pentatricopeptide repeat-containing protein At2g37230 
 tae-r.2   123095905   pentatricopeptide repeat-containing protein At2g37230 
 hvu-r.1   123401270   pentatricopeptide repeat-containing protein At2g37230 
 bdi-r.1   100845603   pentatricopeptide repeat-containing protein At2g37230 
 osa-u.5   4328041   large ribosomal subunit protein mL102 (rPPR5) 
 zma-u.5   100192035   uncharacterized LOC100192035 
 sbi-r.1   8085185   pentatricopeptide repeat-containing protein At2g37230 
 ath-u.5   AT2G37230   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100800532   pentatricopeptide repeat-containing protein At2g37230 
 gma-u.5   100784587   pentatricopeptide repeat-containing protein At2g37230 
 sly-u.5   101265514   large ribosomal subunit protein mL102 (rPPR5) 
 bra-r.6   103857668   pentatricopeptide repeat-containing protein At2g37230 
 vvi-u.5   100267025   large ribosomal subunit protein mL102 (rPPR5) 
 ppo-u.5   7473559   pentatricopeptide repeat-containing protein At2g37230 
 mtr-u.5   25488179   pentatricopeptide repeat-containing protein At2g37230 
 ghi-r.1   107903933   pentatricopeptide repeat-containing protein At2g37230 
 ghi-r.1   107935990   pentatricopeptide repeat-containing protein At2g37230 
 bna-r.1   106441069   pentatricopeptide repeat-containing protein At2g37230 
 bna-r.1   106392741   pentatricopeptide repeat-containing protein At2g37230 
 sot-r.1   102581885   pentatricopeptide repeat-containing protein At2g37230 
 cit-r.1   102621494   pentatricopeptide repeat-containing protein At2g37230 
 nta-r.1   107770362   large ribosomal subunit protein mL102 (rPPR5) 
 nta-r.1   107782030   large ribosomal subunit protein mL102 (rPPR5) 

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Top 50 coexpressed genes to 123087085 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123087085 (tae-r.2 coexpression data)

CoexMap"123087085"


taeLOC123087085 | Entrez gene ID : 123087085    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044364924.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_044364924.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_044364924.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123087085
tae-r.2
for
123047479
tae-r.2
for
123090880
tae-r.2
for
123095905
hvu-r.1
for
123401270
bdi-r.1
for
100845603
osa-u.5
for
4328041
zma-u.5
for
100192035
sbi-r.1
for
8085185
ath-u.5
for
AT2G37230
gma-u.5
for
100800532
gma-u.5
for
100784587
sly-u.5
for
101265514
bra-r.6
for
103857668
vvi-u.5
for
100267025
ppo-u.5
for
7473559
mtr-u.5
for
25488179
ghi-r.1
for
107903933
ghi-r.1
for
107935990
bna-r.1
for
106441069
bna-r.1
for
106392741
sot-r.1
for
102581885
cit-r.1
for
102621494
nta-r.1
for
107770362
nta-r.1
for
107782030


Ortholog ID: 8415
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123047479 LOC123095905 LOC123135511 LOC123401270 LOC100845603 LOC4328041 LOC100192035 LOC8085185 AT2G37230 LOC100800532 LOC100784587 LOC101265514 LOC103857668 LOC100267025 LOC7473559 LOC25488179 LOC107903933 LOC107935990 LOC106441069 LOC106392741 LOC102581885 LOC102621494 LOC107770362 LOC107782030
Function* pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 large ribosomal subunit protein mL102 (rPPR5) uncharacterized LOC100192035 pentatricopeptide repeat-containing protein At2g37230 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 large ribosomal subunit protein mL102 (rPPR5) pentatricopeptide repeat-containing protein At2g37230 large ribosomal subunit protein mL102 (rPPR5) pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 large ribosomal subunit protein mL102 (rPPR5) large ribosomal subunit protein mL102 (rPPR5)
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
nta00564 Glycerophospholipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123047479 123095905 123135511 123401270 100845603 4328041 100192035 8085185 818300 100800532 100784587 101265514 103857668 100267025 7473559 25488179 107903933 107935990 106441069 106392741 102581885 102621494 107770362 107782030
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