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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8085185   pentatricopeptide repeat-containing protein At2g37230 
 zma-u.5   100192035   uncharacterized LOC100192035 
 osa-u.5   4328041   large ribosomal subunit protein mL102 (rPPR5) 
 ath-u.5   AT2G37230   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100800532   pentatricopeptide repeat-containing protein At2g37230 
 gma-u.5   100784587   pentatricopeptide repeat-containing protein At2g37230 
 sly-u.5   101265514   large ribosomal subunit protein mL102 (rPPR5) 
 vvi-u.5   100267025   large ribosomal subunit protein mL102 (rPPR5) 
 ppo-u.5   7473559   pentatricopeptide repeat-containing protein At2g37230 
 mtr-u.5   25488179   pentatricopeptide repeat-containing protein At2g37230 

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Top 50 coexpressed genes to 8085185 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8085185 (sbi-r.1 coexpression data)

CoexMap"8085185"


sbiLOC8085185 | Entrez gene ID : 8085185      
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4172 genes)  IEA  
Protein XP_002453150.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_002453150.1)
Subcellular
localization
TargetP
mito 4,  chlo 3  (predict for XP_002453150.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8085185

.
zma-u.5
for
100192035

.
osa-u.5
for
4328041

.
ath-u.5
for
AT2G37230

.
gma-u.5
for
100800532

.
gma-u.5
for
100784587

.
sly-u.5
for
101265514

.
vvi-u.5
for
100267025

.
ppo-u.5
for
7473559

.
mtr-u.5
for
25488179

.


Ortholog ID: 8415
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT2G37230 LOC100800532 LOC100784587 LOC101265514 LOC4328041 LOC100192035 LOC103857668 LOC100267025 LOC7473559 LOC25488179 LOC123135511 LOC123047479 LOC123401270 LOC107903933 LOC107935990 LOC106441069 LOC106392741 LOC8085185 LOC102581885 LOC102621494 LOC100845603 LOC107782030 LOC107770362
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 large ribosomal subunit protein mL102 (rPPR5) large ribosomal subunit protein mL102 (rPPR5) uncharacterized LOC100192035 pentatricopeptide repeat-containing protein At2g37230 large ribosomal subunit protein mL102 (rPPR5) pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 large ribosomal subunit protein mL102 (rPPR5) large ribosomal subunit protein mL102 (rPPR5)
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818300 100800532 100784587 101265514 4328041 100192035 103857668 100267025 7473559 25488179 123135511 123047479 123401270 107903933 107935990 106441069 106392741 8085185 102581885 102621494 100845603 107782030 107770362
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