Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123090880   pentatricopeptide repeat-containing protein At2g37230 
 osa-u.5   4328041   large ribosomal subunit protein mL102 (rPPR5) 
 zma-u.5   100192035   uncharacterized LOC100192035 
 ath-u.5   AT2G37230   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100800532   pentatricopeptide repeat-containing protein At2g37230 
 gma-u.5   100784587   pentatricopeptide repeat-containing protein At2g37230 
 sly-u.5   101265514   large ribosomal subunit protein mL102 (rPPR5) 
 vvi-u.5   100267025   large ribosomal subunit protein mL102 (rPPR5) 
 ppo-u.5   7473559   pentatricopeptide repeat-containing protein At2g37230 
 mtr-u.5   25488179   pentatricopeptide repeat-containing protein At2g37230 

close


Top 50 coexpressed genes to 123090880 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 123090880 (tae-r.2 coexpression data)

CoexMap"123090880"


taeLOC123090880 | Entrez gene ID : 123090880    
Species tae osa zma ath gma sly vvi ppo mtr hvu cit bra ghi sbi bdi nta bna cre sot
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044368170.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3  (predict for XP_044368170.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_044368170.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123090880
osa-u.5
for
4328041
zma-u.5
for
100192035
ath-u.5
for
AT2G37230
gma-u.5
for
100800532
gma-u.5
for
100784587
sly-u.5
for
101265514
vvi-u.5
for
100267025
ppo-u.5
for
7473559
mtr-u.5
for
25488179


Ortholog ID: 8415
Species tae tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123135511 LOC123047479 LOC123401270 LOC100845603 LOC4328041 LOC100192035 LOC8085185 AT2G37230 LOC100800532 LOC100784587 LOC101265514 LOC103857668 LOC100267025 LOC7473559 LOC25488179 LOC107903933 LOC107935990 LOC106441069 LOC106392741 LOC102581885 LOC102621494 LOC107782030 LOC107770362
Function* pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 large ribosomal subunit protein mL102 (rPPR5) uncharacterized LOC100192035 pentatricopeptide repeat-containing protein At2g37230 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 large ribosomal subunit protein mL102 (rPPR5) pentatricopeptide repeat-containing protein At2g37230 large ribosomal subunit protein mL102 (rPPR5) pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 pentatricopeptide repeat-containing protein At2g37230 large ribosomal subunit protein mL102 (rPPR5) large ribosomal subunit protein mL102 (rPPR5)
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123135511 123047479 123401270 100845603 4328041 100192035 8085185 818300 100800532 100784587 101265514 103857668 100267025 7473559 25488179 107903933 107935990 106441069 106392741 102581885 102621494 107782030 107770362
The preparation time of this page was 0.1 [sec].