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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123087420   psbP-like protein 1, chloroplastic 
 osa-u.5   4345346   psbP-like protein 1, chloroplastic 
 osa-u.5   4348816   uncharacterized LOC4348816 
 osa-u.5   9268431   psbP-like protein 1, chloroplastic 
 zma-u.5   100281199   chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa protein 
 ath-u.5   PPL1   PsbP-like protein 1 
 gma-u.5   100789641   psbP-like protein 1, chloroplastic 
 gma-u.5   100305918   psbP-like protein 1, chloroplastic 
 sly-u.5   101259227   psbP-like protein 1, chloroplastic 
 vvi-u.5   PSBP2   putative oxygen evolving enhancer protein 
 ppo-u.5   7458603   psbP-like protein 1, chloroplastic 
 mtr-u.5   25497707   psbP-like protein 1, chloroplastic 

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Top 50 coexpressed genes to 123087420 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123087420 (tae-r.2 coexpression data)

CoexMap"123087420"


taeLOC123087420 | Entrez gene ID : 123087420    
Species tae osa zma ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi sot nta cre
Paralog 1 3 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes00195 [list] [network] Photosynthesis (236 genes)
GO BP
GO:0015979 [list] [network] photosynthesis  (342 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (75 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (83 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (123 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (1095 genes)  IEA  
Protein XP_044365359.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_044365359.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for XP_044365359.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123087420
osa-u.5
for
4345346
osa-u.5
for
4348816
osa-u.5
for
9268431
zma-u.5
for
100281199
ath-u.5
for
PPL1
gma-u.5
for
100789641
gma-u.5
for
100305918
sly-u.5
for
101259227
vvi-u.5
for
PSBP2
ppo-u.5
for
7458603
mtr-u.5
for
25497707


Ortholog ID: 8055
Species tae tae hvu bdi osa osa zma sbi ath gma gma sly vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123095571 LOC123087420 LOC123446809 LOC100840391 LOC4345346 LOC4348816 LOC100281199 LOC8085721 PPL1 LOC100789641 LOC100305918 LOC101259227 PSBP2 LOC7458603 LOC25497707 LOC107960084 LOC107904111 LOC106367527 LOC106445351 LOC102585358 LOC102629780 LOC107786772 LOC107774757 CHLRE_12g509050v5
Function* psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic uncharacterized LOC4348816 chloroplast oxygen-evolving complex/thylakoid lumenal 25.6kDa protein psbP-like protein 1, chloroplastic PsbP-like protein 1 psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic putative oxygen evolving enhancer protein psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic psbP-like protein 1, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00196 Photosynthesis - antenna proteins 3
tae00195 Photosynthesis 3
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 4
tae00196 Photosynthesis - antenna proteins 2
tae00740 Riboflavin metabolism 2
tae00790 Folate biosynthesis 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 7
hvu00710 Carbon fixation by Calvin cycle 4
hvu00195 Photosynthesis 4
hvu00630 Glyoxylate and dicarboxylate metabolism 4
hvu00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 7
bdi01200 Carbon metabolism 7
bdi00710 Carbon fixation by Calvin cycle 5
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 4
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 4
ath00710 Carbon fixation by Calvin cycle 2
ath00260 Glycine, serine and threonine metabolism 2
ath00630 Glyoxylate and dicarboxylate metabolism 2
ath00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 2
gma00260 Glycine, serine and threonine metabolism 2
gma00630 Glyoxylate and dicarboxylate metabolism 2
gma00670 One carbon pool by folate 2
gma00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 6
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma01240 Biosynthesis of cofactors 2
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 3
sly00710 Carbon fixation by Calvin cycle 2
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00710 Carbon fixation by Calvin cycle 3
vvi01200 Carbon metabolism 3
vvi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00710 Carbon fixation by Calvin cycle 6
ppo01200 Carbon metabolism 6
ppo00195 Photosynthesis 4
ppo00010 Glycolysis / Gluconeogenesis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 5
mtr00710 Carbon fixation by Calvin cycle 4
mtr00195 Photosynthesis 4
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
ghi00051 Fructose and mannose metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 7
sot01200 Carbon metabolism 4
sot00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00195 Photosynthesis 2
nta00620 Pyruvate metabolism 2
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123095571 123087420 123446809 100840391 4345346 4348816 100281199 8085721 824699 100789641 100305918 101259227 100259776 7458603 25497707 107960084 107904111 106367527 106445351 102585358 102629780 107786772 107774757 5716532
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