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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123092659   50S ribosomal protein L4, chloroplastic 
 tae-r.2   123085380   50S ribosomal protein L4, chloroplastic 
 tae-r.2   123097964   50S ribosomal protein L4, chloroplastic 
 hvu-r.1   123449072   50S ribosomal protein L4, chloroplastic 
 bdi-r.1   100845528   50S ribosomal protein L4, chloroplastic 
 osa-u.5   4332348   large ribosomal subunit protein uL4c 
 zma-u.5   100283234   50S ribosomal protein L4-like 
 sbi-r.1   8078804   50S ribosomal protein L4, chloroplastic 
 ath-u.5   RPL4   ribosomal protein L4 
 gma-u.5   100803701   50S ribosomal protein L4, chloroplastic 
 gma-u.5   100790380   50S ribosomal protein L4, chloroplastic 
 sly-u.5   101254712   large ribosomal subunit protein uL4c 
 bra-r.6   103843956   50S ribosomal protein L4, chloroplastic 
 vvi-u.5   104879610   large ribosomal subunit protein uL4c 
 ppo-u.5   7492297   50S ribosomal protein L4, chloroplastic 
 mtr-u.5   25500064   50S ribosomal protein L4, chloroplastic 
 ghi-r.1   107932518   50S ribosomal protein L4, chloroplastic 
 ghi-r.1   107931938   50S ribosomal protein L4, chloroplastic 
 bna-r.1   106400920   50S ribosomal protein L4, chloroplastic 
 bna-r.1   106391122   50S ribosomal protein L4, chloroplastic 
 bna-r.1   125594915   50S ribosomal protein L4, chloroplastic 
 sot-r.1   102596426   50S ribosomal protein L4, chloroplastic 
 cit-r.1   102612217   50S ribosomal protein L4, chloroplastic 
 nta-r.1   107817573   50S ribosomal protein L4, chloroplastic 
 nta-r.1   107828567   large ribosomal subunit protein uL4c-like 
 cre-r.1   CHLRE_11g479500v5   uncharacterized protein 

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Top 50 coexpressed genes to 123092659 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123092659 (tae-r.2 coexpression data)

CoexMap"123092659"


taeLOC123092659 | Entrez gene ID : 123092659    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 2 1 1 1 1 1 2 3 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03010 [list] [network] Ribosome (7602 genes)
GO BP
GO:0006412 [list] [network] translation  (1629 genes)  IEA  
GO CC
GO:0005840 [list] [network] ribosome  (1114 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1103 genes)  IEA  
Protein XP_044370412.1 [sequence] [blastp]
XP_044370413.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_044370412.1)
chlo 10  (predict for XP_044370413.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_044370412.1)
chlo 9  (predict for XP_044370413.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123092659
tae-r.2
for
123085380
tae-r.2
for
123097964
hvu-r.1
for
123449072
bdi-r.1
for
100845528
osa-u.5
for
4332348
zma-u.5
for
100283234
sbi-r.1
for
8078804
ath-u.5
for
RPL4
gma-u.5
for
100803701
gma-u.5
for
100790380
sly-u.5
for
101254712
bra-r.6
for
103843956
vvi-u.5
for
104879610
ppo-u.5
for
7492297
mtr-u.5
for
25500064
ghi-r.1
for
107932518
ghi-r.1
for
107931938
bna-r.1
for
106400920
bna-r.1
for
106391122
bna-r.1
for
125594915
sot-r.1
for
102596426
cit-r.1
for
102612217
nta-r.1
for
107817573
nta-r.1
for
107828567
cre-r.1
for
CHLRE_11g479500v5


Ortholog ID: 9763
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC123092659 LOC123085380 LOC123097964 LOC123449072 LOC100845528 LOC4332348 LOC100283234 LOC8078804 RPL4 LOC100803701 LOC100790380 LOC101254712 LOC103843956 LOC104879610 LOC7492297 LOC25500064 LOC107932518 LOC107931938 LOC106400920 LOC106391122 LOC125594915 LOC102596426 LOC102612217 LOC107817573 LOC107828567 CHLRE_11g479500v5
Function* 50S ribosomal protein L4, chloroplastic 50S ribosomal protein L4, chloroplastic 50S ribosomal protein L4, chloroplastic 50S ribosomal protein L4, chloroplastic 50S ribosomal protein L4, chloroplastic large ribosomal subunit protein uL4c 50S ribosomal protein L4-like 50S ribosomal protein L4, chloroplastic ribosomal protein L4 50S ribosomal protein L4, chloroplastic 50S ribosomal protein L4, chloroplastic large ribosomal subunit protein uL4c 50S ribosomal protein L4, chloroplastic large ribosomal subunit protein uL4c 50S ribosomal protein L4, chloroplastic 50S ribosomal protein L4, chloroplastic 50S ribosomal protein L4, chloroplastic 50S ribosomal protein L4, chloroplastic 50S ribosomal protein L4, chloroplastic 50S ribosomal protein L4, chloroplastic 50S ribosomal protein L4, chloroplastic 50S ribosomal protein L4, chloroplastic 50S ribosomal protein L4, chloroplastic 50S ribosomal protein L4, chloroplastic large ribosomal subunit protein uL4c-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
tae00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 12
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi01240 Biosynthesis of cofactors 2
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
ppo00860 Porphyrin metabolism 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 6
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna00860 Porphyrin metabolism 4
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
bna00860 Porphyrin metabolism 4
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
bna00860 Porphyrin metabolism 4
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 16
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 12
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123092659 123085380 123097964 123449072 100845528 4332348 100283234 8078804 837243 100803701 100790380 101254712 103843956 104879610 7492297 25500064 107932518 107931938 106400920 106391122 125594915 102596426 102612217 107817573 107828567 5722911
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