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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123095860   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 tae-r.2   123134130   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 tae-r.2   123141478   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 tae-r.2   123130629   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 hvu-r.1   123402625   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 bdi-r.1   100839323   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 osa-u.5   4329766   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 zma-u.5   103653672   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 zma-u.5   103627333   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 sbi-r.1   8070551   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 ath-u.5   PnsL2   PsbQ-like 2 
 gma-u.5   100807480   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 sly-u.5   101245163   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 bra-r.6   103872111   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 bra-r.6   103842995   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 vvi-u.5   100243071   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 ppo-u.5   7492927   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 mtr-u.5   11413262   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 ghi-r.1   107918812   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 ghi-r.1   107893679   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 bna-r.1   125587478   photosynthetic NDH subunit of lumenal location 2, chloroplastic-like 
 bna-r.1   106401704   photosynthetic NDH subunit of lumenal location 2, chloroplastic-like 
 bna-r.1   106380909   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 sot-r.1   102579009   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 cit-r.1   102608346   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 nta-r.1   107773657   photosynthetic NDH subunit of lumenal location 2, chloroplastic 
 nta-r.1   107831039   photosynthetic NDH subunit of lumenal location 2, chloroplastic 

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Top 50 coexpressed genes to 123095860 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123095860 (tae-r.2 coexpression data)

CoexMap"123095860"


taeLOC123095860 | Entrez gene ID : 123095860    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 1 2 1 1 1 1 2 1 1 1 2 3 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes00195 [list] [network] Photosynthesis (236 genes)
GO BP
GO:0009767 [list] [network] photosynthetic electron transport chain  (64 genes)  IEA  
GO:0015979 [list] [network] photosynthesis  (342 genes)  IEA  
GO CC
GO:0009654 [list] [network] photosystem II oxygen evolving complex  (75 genes)  IEA  
GO:0019898 [list] [network] extrinsic component of membrane  (83 genes)  IEA  
GO:0009523 [list] [network] photosystem II  (123 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (1890 genes)  IEA  
GO MF
GO:0005509 [list] [network] calcium ion binding  (1095 genes)  IEA  
Protein XP_044373367.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_044373367.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_044373367.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123095860
tae-r.2
for
123134130
tae-r.2
for
123141478
tae-r.2
for
123130629
hvu-r.1
for
123402625
bdi-r.1
for
100839323
osa-u.5
for
4329766
zma-u.5
for
103653672
zma-u.5
for
103627333
sbi-r.1
for
8070551
ath-u.5
for
PnsL2
gma-u.5
for
100807480
sly-u.5
for
101245163
bra-r.6
for
103872111
bra-r.6
for
103842995
vvi-u.5
for
100243071
ppo-u.5
for
7492927
mtr-u.5
for
11413262
ghi-r.1
for
107918812
ghi-r.1
for
107893679
bna-r.1
for
125587478
bna-r.1
for
106401704
bna-r.1
for
106380909
sot-r.1
for
102579009
cit-r.1
for
102608346
nta-r.1
for
107773657
nta-r.1
for
107831039


Ortholog ID: 8696
Species tae tae tae hvu bdi osa zma zma sbi ath gma sly bra bra vvi ppo mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC123095860 LOC123141478 LOC123130629 LOC123402625 LOC100839323 LOC4329766 LOC103653672 LOC103627333 LOC8070551 PnsL2 LOC100807480 LOC101245163 LOC103872111 LOC103842995 LOC100243071 LOC7492927 LOC11413262 LOC107918812 LOC107893679 LOC125587478 LOC106380909 LOC106369134 LOC102579009 LOC102608346 LOC107773657 LOC107831039
Function* photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic PsbQ-like 2 photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic-like photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic-like photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic photosynthetic NDH subunit of lumenal location 2, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 12
tae00710 Carbon fixation by Calvin cycle 12
tae01200 Carbon metabolism 12
tae00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 12
tae00710 Carbon fixation by Calvin cycle 12
tae01200 Carbon metabolism 12
tae00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 9
tae00710 Carbon fixation by Calvin cycle 9
tae01200 Carbon metabolism 9
tae00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu00195 Photosynthesis 2
hvu00710 Carbon fixation by Calvin cycle 2
hvu00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00195 Photosynthesis 4
bdi01200 Carbon metabolism 4
bdi00710 Carbon fixation by Calvin cycle 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 4
zma00710 Carbon fixation by Calvin cycle 3
zma01200 Carbon metabolism 3
zma00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma01200 Carbon metabolism 3
zma00196 Photosynthesis - antenna proteins 2
zma00710 Carbon fixation by Calvin cycle 2
zma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 8
sbi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma00195 Photosynthesis 4
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 4
bra00710 Carbon fixation by Calvin cycle 3
bra00910 Nitrogen metabolism 2
bra00195 Photosynthesis 2
bra00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 3
bra00630 Glyoxylate and dicarboxylate metabolism 3
bra01200 Carbon metabolism 3
bra00260 Glycine, serine and threonine metabolism 2
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00710 Carbon fixation by Calvin cycle 3
mtr01200 Carbon metabolism 3
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00030 Pentose phosphate pathway 2
mtr00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 8
ghi00710 Carbon fixation by Calvin cycle 6
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00195 Photosynthesis 4
ghi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 8
ghi00710 Carbon fixation by Calvin cycle 6
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00195 Photosynthesis 4
ghi00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
bna00260 Glycine, serine and threonine metabolism 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
bna00670 One carbon pool by folate 2
bna00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
bna00260 Glycine, serine and threonine metabolism 3
bna00630 Glyoxylate and dicarboxylate metabolism 3
bna00670 One carbon pool by folate 3
bna00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 4
bna00260 Glycine, serine and threonine metabolism 3
bna00630 Glyoxylate and dicarboxylate metabolism 3
bna00670 One carbon pool by folate 3
bna00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 6
sot01200 Carbon metabolism 3
sot00630 Glyoxylate and dicarboxylate metabolism 2
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 3
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 4
nta00630 Glyoxylate and dicarboxylate metabolism 4
nta00670 One carbon pool by folate 4
nta00785 Lipoic acid metabolism 4
nta01200 Carbon metabolism 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123095860 123141478 123130629 123402625 100839323 4329766 103653672 103627333 8070551 837974 100807480 101245163 103872111 103842995 100243071 7492927 11413262 107918812 107893679 125587478 106380909 106369134 102579009 102608346 107773657 107831039
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