ATTED-II : GeneCoexpression result

Species	Gene	Description
tae-r.2	123096001	uncharacterized LOC123096001
tae-r.2	123096002	uncharacterized LOC123096002
tae-r.2	123090987	uncharacterized LOC123090987
tae-r.2	123090986	uncharacterized LOC123090986
hvu-r.1	123447670	uncharacterized LOC123447670
hvu-r.1	123447671	uncharacterized LOC123447671
bdi-r.1	100834148	uncharacterized LOC100834148
osa-u.5	4333999	uncharacterized LOC4333999
zma-u.5	100275243	uncharacterized LOC100275243
sbi-r.1	8060526	uncharacterized LOC8060526
ath-u.5	AT1G49975	photosystem I reaction center subunit N
gma-u.5	100800755	uncharacterized LOC100800755
bra-r.6	103871378	uncharacterized LOC103871378
vvi-u.5	100247999	uncharacterized LOC100247999
ppo-u.5	7478666	uncharacterized LOC7478666
mtr-u.5	11415212	uncharacterized LOC11415212
mtr-u.5	25485324	uncharacterized LOC25485324
ghi-r.1	121210817	uncharacterized LOC121210817
bna-r.1	BNAA06G37650D	uncharacterized BNAA06G37650D
bna-r.1	BNAC06G02980D	uncharacterized BNAC06G02980D
sot-r.1	102584825	uncharacterized LOC102584825
cit-r.1	102627099	uncharacterized LOC102627099
nta-r.1	107781256	uncharacterized LOC107781256
nta-r.1	107777951	uncharacterized LOC107777951
cre-r.1	CHLRE_02g086100v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0015979 [list] [network] photosynthesis

(342 genes)

IEA

GO CC

GO:0009522 [list] [network] photosystem I

(33 genes)

IEA

GO MF

Protein

XP_044373515.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, mito 3

(predict for XP_044373515.1)

Subcellular
localization
TargetP

chlo 5, mito 4

(predict for XP_044373515.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123096001	tae-r.2 for 123096002	tae-r.2 for 123090987	tae-r.2 for 123090986	hvu-r.1 for 123447670	hvu-r.1 for 123447671	bdi-r.1 for 100834148	osa-u.5 for 4333999	zma-u.5 for 100275243	sbi-r.1 for 8060526	ath-u.5 for AT1G49975	gma-u.5 for 100800755	bra-r.6 for 103871378	vvi-u.5 for 100247999	ppo-u.5 for 7478666	mtr-u.5 for 11415212	mtr-u.5 for 25485324	ghi-r.1 for 121210817	bna-r.1 for BNAA06G37650D	bna-r.1 for BNAC06G02980D	sot-r.1 for 102584825	cit-r.1 for 102627099	nta-r.1 for 107781256	nta-r.1 for 107777951	cre-r.1 for CHLRE_02g086100v5

Ortholog

Ortholog ID: 9835

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC123090987

uncharacterized LOC123090986

uncharacterized LOC123086988

uncharacterized LOC123447670

uncharacterized LOC123447671

uncharacterized LOC100834148

uncharacterized LOC4333999

uncharacterized LOC100275243

uncharacterized LOC8060526

photosystem I reaction center subunit N

uncharacterized LOC100800755

uncharacterized LOC103871378

uncharacterized LOC100247999

uncharacterized LOC7478666

uncharacterized LOC11415212

uncharacterized LOC25485324

uncharacterized LOC121210817

uncharacterized BNAA06G37650D

uncharacterized BNAC06G02980D

uncharacterized LOC102584825

uncharacterized LOC102627099

uncharacterized LOC107781256

uncharacterized LOC107777951

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00910	Nitrogen metabolism	7
tae00906	Carotenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00710	Carbon fixation by Calvin cycle	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00710	Carbon fixation by Calvin cycle	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00630	Glyoxylate and dicarboxylate metabolism	2
osa01200	Carbon metabolism	2
osa00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00196	Photosynthesis - antenna proteins	5
sbi00710	Carbon fixation by Calvin cycle	2
sbi01200	Carbon metabolism	2
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	3
mtr00520	Amino sugar and nucleotide sugar metabolism	2
mtr01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	8
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00195	Photosynthesis	14
sot00196	Photosynthesis - antenna proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00195	Photosynthesis	4
cit03010	Ribosome	3

Expression

Expression pattern

Entrez Gene ID^*

123090987

123090986

123086988

123447670

123447671

100834148

4333999

100275243

8060526

841421

100800755

103871378

100247999

7478666

11415212

25485324

121210817

106346148

106424411

102584825

102627099

107781256

107777951

5727394

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123096001 (tae-r.2 coexpression data)

Top 50 enrichment test to 123096001 (tae-r.2 coexpression data)


Species	tae	hvu	bdi	osa	zma	sbi	ath	gma	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre	sly
Paralog	4	2	1	1	1	1	1	1	1	1	1	2	1	2	1	1	2	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123096001 (tae-r.2 coexpression data)

Top 50 enrichment test to 123096001 (tae-r.2 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**