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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123112472   uncharacterized LOC123112472 
 osa-u.5   4332567   uncharacterized LOC4332567 
 zma-u.5   103634524   transducin family protein / WD-40 repeat family protein 
 ath-u.5   AT5G11240   transducin family protein / WD-40 repeat family protein 
 gma-u.5   102667004   WD repeat-containing protein 43 
 gma-u.5   100815458   WD repeat-containing protein 43 
 sly-u.5   101243653   uncharacterized LOC101243653 
 vvi-u.5   100251740   uncharacterized LOC100251740 
 ppo-u.5   7496504   uncharacterized LOC7496504 
 mtr-u.5   11420256   uncharacterized LOC11420256 

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Top 50 coexpressed genes to 123112472 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123112472 (tae-r.2 coexpression data)

CoexMap"123112472"


taeLOC123112472 | Entrez gene ID : 123112472    
Species tae osa zma ath gma sly vvi ppo mtr hvu cit bra ghi sbi bdi nta bna cre sot
Paralog 1 1 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03008 [list] [network] Ribosome biogenesis in eukaryotes (6831 genes)
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044389399.1 [sequence] [blastp]
XP_044389407.1 [sequence] [blastp]
XP_044389416.1 [sequence] [blastp]
XP_044389425.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 3,  cyto 2  (predict for XP_044389399.1)
chlo 4,  nucl 3,  cyto 2  (predict for XP_044389407.1)
chlo 4,  nucl 3,  cyto 2  (predict for XP_044389416.1)
chlo 4,  cyto 2,  nucl 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_044389425.1)
Subcellular
localization
TargetP
other 4,  scret 3  (predict for XP_044389399.1)
other 4,  scret 3  (predict for XP_044389407.1)
other 4,  scret 3  (predict for XP_044389416.1)
other 4,  scret 3  (predict for XP_044389425.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123112472
osa-u.5
for
4332567
zma-u.5
for
103634524
ath-u.5
for
AT5G11240
gma-u.5
for
102667004
gma-u.5
for
100815458
sly-u.5
for
101243653
vvi-u.5
for
100251740
ppo-u.5
for
7496504
mtr-u.5
for
11420256


Ortholog ID: 7711
Species tae tae hvu bdi osa zma sbi ath gma gma sly bra bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123112472 LOC123085629 LOC123448861 LOC100843293 LOC4332567 LOC103634524 LOC8081109 AT5G11240 LOC100784148 LOC100815458 LOC101243653 LOC103850762 LOC103846739 LOC100251740 LOC7496504 LOC11420256 LOC107888936 LOC107891849 LOC106372422 LOC106383509 LOC102578394 LOC102623293 LOC107796022 LOC107817394 CHLRE_12g538500v5
Function* uncharacterized LOC123112472 uncharacterized LOC123085629 uncharacterized LOC123448861 WD repeat-containing protein 43 uncharacterized LOC4332567 transducin family protein / WD-40 repeat family protein uncharacterized LOC8081109 transducin family protein / WD-40 repeat family protein WD repeat-containing protein 43 WD repeat-containing protein 43 uncharacterized LOC101243653 WD repeat-containing protein 43 WD repeat-containing protein 43 uncharacterized LOC100251740 uncharacterized LOC7496504 uncharacterized LOC11420256 WD repeat-containing protein 43 WD repeat-containing protein 43 WD repeat-containing protein 43-like WD repeat-containing protein 43 WD repeat-containing protein 43 uncharacterized LOC102623293 uncharacterized LOC107796022 uncharacterized LOC107817394 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
zma00230 Purine metabolism 2
zma00250 Alanine, aspartate and glutamate metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03013 Nucleocytoplasmic transport 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
sot03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta03008 Ribosome biogenesis in eukaryotes 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta03040 Spliceosome 4
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123112472 123085629 123448861 100843293 4332567 103634524 8081109 830994 100784148 100815458 101243653 103850762 103846739 100251740 7496504 11420256 107888936 107891849 106372422 106383509 102578394 102623293 107796022 107817394 5718445
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