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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123122286   transcription initiation factor TFIID subunit 5 
 tae-r.2   123104518   transcription initiation factor TFIID subunit 5 
 tae-r.2   123112804   transcription initiation factor TFIID subunit 5 
 tae-r.2   123149467   transcription initiation factor TFIID subunit 5 
 hvu-r.1   123413582   transcription initiation factor TFIID subunit 5 
 bdi-r.1   100837458   transcription initiation factor TFIID subunit 5 
 osa-u.5   4341679   transcription initiation factor TFIID subunit 5 
 osa-u.5   4342682   transcription initiation factor TFIID subunit 5 
 zma-u.5   103642689   transcription initiation factor TFIID subunit 5 
 zma-u.5   103630828   transcription initiation factor TFIID subunit 5 
 zma-u.5   100501797   uncharacterized LOC100501797 
 sbi-r.1   110431215   transcription initiation factor TFIID subunit 5 
 ath-u.5   TAF5   TBP-associated factor 5 
 gma-u.5   100805953   transcription initiation factor TFIID subunit 5 
 gma-u.5   100790500   transcription initiation factor TFIID subunit 5 
 gma-u.5   100781563   transcription initiation factor TFIID subunit 5 
 sly-u.5   101268876   transcription initiation factor TFIID subunit 5 
 bra-r.6   103854775   transcription initiation factor TFIID subunit 5 
 bra-r.6   103837080   transcription initiation factor TFIID subunit 5 
 vvi-u.5   100254222   transcription initiation factor TFIID subunit 5 
 ppo-u.5   7489149   transcription initiation factor TFIID subunit 5 
 ppo-u.5   7465413   transcription initiation factor TFIID subunit 5 
 mtr-u.5   11425826   transcription initiation factor TFIID subunit 5 
 ghi-r.1   121219257   transcription initiation factor TFIID subunit 5 
 ghi-r.1   107958992   transcription initiation factor TFIID subunit 5 
 ghi-r.1   107953742   transcription initiation factor TFIID subunit 5 
 bna-r.1   106365904   transcription initiation factor TFIID subunit 5 
 bna-r.1   106365993   transcription initiation factor TFIID subunit 5 
 bna-r.1   106404002   transcription initiation factor TFIID subunit 5-like 
 sot-r.1   102605539   transcription initiation factor TFIID subunit 5 
 cit-r.1   102624994   transcription initiation factor TFIID subunit 5 
 nta-r.1   107830809   transcription initiation factor TFIID subunit 5 
 nta-r.1   107829673   transcription initiation factor TFIID subunit 5-like 
 cre-r.1   CHLRE_12g526950v5   uncharacterized protein 

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Top 50 coexpressed genes to 123122286 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123122286 (tae-r.2 coexpression data)

CoexMap"123122286"


taeLOC123122286 | Entrez gene ID : 123122286    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 1 1 2 3 1 1 3 1 2 1 2 1 3 3 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03022 [list] [network] Basal transcription factors (188 genes)
GO BP
GO:0006367 [list] [network] transcription initiation at RNA polymerase II promoter  (143 genes)  IEA  
GO CC
GO:0005669 [list] [network] transcription factor TFIID complex  (71 genes)  IEA  
GO MF
GO:0016251 [list] [network] RNA polymerase II general transcription initiation factor activity  (68 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044398399.1 [sequence] [blastp]
XP_044398400.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 2  (predict for XP_044398399.1)
nucl 4,  chlo 3,  cysk_nucl 3  (predict for XP_044398400.1)
Subcellular
localization
TargetP
other 7  (predict for XP_044398399.1)
other 5,  mito 3  (predict for XP_044398400.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123122286
tae-r.2
for
123104518
tae-r.2
for
123112804
tae-r.2
for
123149467
hvu-r.1
for
123413582
bdi-r.1
for
100837458
osa-u.5
for
4341679
osa-u.5
for
4342682
zma-u.5
for
103642689
zma-u.5
for
103630828
zma-u.5
for
100501797
sbi-r.1
for
110431215
ath-u.5
for
TAF5
gma-u.5
for
100805953
gma-u.5
for
100790500
gma-u.5
for
100781563
sly-u.5
for
101268876
bra-r.6
for
103854775
bra-r.6
for
103837080
vvi-u.5
for
100254222
ppo-u.5
for
7489149
ppo-u.5
for
7465413
mtr-u.5
for
11425826
ghi-r.1
for
121219257
ghi-r.1
for
107958992
ghi-r.1
for
107953742
bna-r.1
for
106365904
bna-r.1
for
106365993
bna-r.1
for
106404002
sot-r.1
for
102605539
cit-r.1
for
102624994
nta-r.1
for
107830809
nta-r.1
for
107829673
cre-r.1
for
CHLRE_12g526950v5


Ortholog ID: 5378
Species tae tae hvu bdi osa osa zma zma zma sbi ath gma gma gma sly bra bra vvi ppo ppo mtr ghi ghi ghi bna bna bna sot cit nta nta cre
Symbol LOC123104518 LOC123163720 LOC123413582 LOC100837458 LOC4341679 LOC4342682 LOC103642689 LOC103630828 LOC100501797 LOC110431215 TAF5 LOC100805953 LOC100790500 LOC100781563 LOC101268876 LOC103854775 LOC103837080 LOC100254222 LOC7489149 LOC7465413 LOC11425826 LOC121219257 LOC107958992 LOC107953742 LOC106365993 LOC106404002 LOC106382625 LOC102605539 LOC102624994 LOC107830809 LOC107829673 CHLRE_12g526950v5
Function* transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 uncharacterized LOC100501797 transcription initiation factor TFIID subunit 5 TBP-associated factor 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5-like transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5 transcription initiation factor TFIID subunit 5-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 3
sly03018 RNA degradation 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03022 Basal transcription factors 2
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
ppo04136 Autophagy - other 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
mtr03083 Polycomb repressive complex 4
mtr03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
ghi03022 Basal transcription factors 3
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03022 Basal transcription factors 3
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
ghi03022 Basal transcription factors 3
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta03022 Basal transcription factors 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 5
cre03020 RNA polymerase 4
cre03420 Nucleotide excision repair 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123104518 123163720 123413582 100837458 4341679 4342682 103642689 103630828 100501797 110431215 832586 100805953 100790500 100781563 101268876 103854775 103837080 100254222 7489149 7465413 11425826 121219257 107958992 107953742 106365993 106404002 106382625 102605539 102624994 107830809 107829673 5722474
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