ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
tae-r.2	123120056	DEAD-box ATP-dependent RNA helicase 27
tae-r.2	123111068	DEAD-box ATP-dependent RNA helicase 27
hvu-r.1	123399846	DEAD-box ATP-dependent RNA helicase 27
bdi-r.1	104584763	DEAD-box ATP-dependent RNA helicase 27
osa-u.5	4334469	DEAD-box ATP-dependent RNA helicase 27-like
zma-u.5	100501728	DEAD-box ATP-dependent RNA helicase 51
zma-u.5	103640803	DEAD-box ATP-dependent RNA helicase 27
sbi-r.1	8066029	putative DEAD-box ATP-dependent RNA helicase 51
sbi-r.1	8061145	DEAD-box ATP-dependent RNA helicase 27
ath-u.5	AT3G18600	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ath-u.5	AT5G65900	DEA(D/H)-box RNA helicase family protein
gma-u.5	100798885	DEAD-box ATP-dependent RNA helicase 27
gma-u.5	100798290	DEAD-box ATP-dependent RNA helicase 27
gma-u.5	100797375	DEAD-box ATP-dependent RNA helicase 27
sly-u.5	101245343	DEAD-box ATP-dependent RNA helicase 51
bra-r.6	103874030	DEAD-box ATP-dependent RNA helicase 27
bra-r.6	103869547	DEAD-box ATP-dependent RNA helicase 51
bra-r.6	103859759	DEAD-box ATP-dependent RNA helicase 51
vvi-u.5	100242258	DEAD-box ATP-dependent RNA helicase 27
ppo-u.5	18102018	DEAD-box ATP-dependent RNA helicase 51-like
ppo-u.5	7468000	DEAD-box ATP-dependent RNA helicase 51
mtr-u.5	25486792	DEAD-box ATP-dependent RNA helicase 27
mtr-u.5	11441584	DEAD-box ATP-dependent RNA helicase 27
mtr-u.5	11438740	DEAD-box ATP-dependent RNA helicase 51
ghi-r.1	107953363	DEAD-box ATP-dependent RNA helicase 51
ghi-r.1	107949736	DEAD-box ATP-dependent RNA helicase 51
ghi-r.1	107926589	DEAD-box ATP-dependent RNA helicase 51
bna-r.1	111212991	DEAD-box ATP-dependent RNA helicase 51-like
bna-r.1	106439550	DEAD-box ATP-dependent RNA helicase 51
bna-r.1	106346976	DEAD-box ATP-dependent RNA helicase 51
sot-r.1	102597715	DEAD-box ATP-dependent RNA helicase 51-like
cit-r.1	102619669	DEAD-box ATP-dependent RNA helicase 51
nta-r.1	107806417	DEAD-box ATP-dependent RNA helicase 27
nta-r.1	107794494	DEAD-box ATP-dependent RNA helicase 51
cre-r.1	CHLRE_07g314900v5	uncharacterized protein

Top 50 coexpressed genes to 123120056 (tae-r.2 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 123120056 (tae-r.2 coexpression data)

CoexMap"123130995"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0003724 [list] [network] RNA helicase activity	(186 genes)	IEA
GO:0005524 [list] [network] ATP binding	(7858 genes)	IEA
GO:0003676 [list] [network] nucleic acid binding	(11810 genes)	IEA

Protein

XP_044406710.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, chlo 1, plas 1, cyto 1, mito 1, golg_plas 1, cysk_plas 1, E.R._plas 1

(predict for XP_044406710.1)

Subcellular
localization
TargetP

other 9

(predict for XP_044406710.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	tae-r.2 for 123120056	tae-r.2 for 123111068	hvu-r.1 for 123399846	bdi-r.1 for 104584763	osa-u.5 for 4334469	zma-u.5 for 100501728	zma-u.5 for 103640803	sbi-r.1 for 8066029	sbi-r.1 for 8061145	ath-u.5 for AT3G18600	ath-u.5 for AT5G65900	gma-u.5 for 100798885	gma-u.5 for 100798290	gma-u.5 for 100797375	sly-u.5 for 101245343	bra-r.6 for 103874030	bra-r.6 for 103869547	bra-r.6 for 103859759	vvi-u.5 for 100242258	ppo-u.5 for 18102018	ppo-u.5 for 7468000	mtr-u.5 for 25486792	mtr-u.5 for 11441584	mtr-u.5 for 11438740	ghi-r.1 for 107953363	ghi-r.1 for 107949736	ghi-r.1 for 107926589	bna-r.1 for 111212991	bna-r.1 for 106439550	bna-r.1 for 106346976	sot-r.1 for 102597715	cit-r.1 for 102619669	nta-r.1 for 107806417	nta-r.1 for 107794494	cre-r.1 for CHLRE_07g314900v5

Ortholog

Ortholog ID: 3222

Species

tae

hvu

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*