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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4341572   pentatricopeptide repeat-containing protein At4g16470 
 ath-u.5   AT4G16470   Tetratricopeptide repeat (TPR)-like superfamily protein 
 sly-u.5   101260595   thymidine kinase a-like 
 bra-r.6   103869554   pentatricopeptide repeat-containing protein At4g16470 
 vvi-u.5   100262452   thymidine kinase 
 ghi-r.1   107962084   pentatricopeptide repeat-containing protein At4g16470 
 ghi-r.1   107901819   pentatricopeptide repeat-containing protein At4g16470 
 bna-r.1   106446359   pentatricopeptide repeat-containing protein At4g16470 
 bna-r.1   106421982   pentatricopeptide repeat-containing protein At4g16470-like 
 cit-r.1   102621433   thymidine kinase a 
 nta-r.1   107804258   pentatricopeptide repeat-containing protein At4g16470-like 
 nta-r.1   107788438   pentatricopeptide repeat-containing protein At4g16470-like 
 nta-r.1   107807865   uncharacterized LOC107807865 

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Top 50 coexpressed genes to 4341572 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4341572 (osa-u.5 coexpression data)

CoexMap"123148376"


taeLOC123148376 | Entrez gene ID : 123148376    
Species osa ath sly bra vvi ghi bna cit nta gma sot zma cre ppo sbi tae mtr hvu bdi
Paralog 1 1 1 1 1 2 2 1 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (1066 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (4004 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044423701.1 [sequence] [blastp]
XP_044423702.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 4  (predict for XP_044423701.1)
chlo 6,  cyto 4  (predict for XP_044423702.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_044423701.1)
mito 5  (predict for XP_044423702.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4341572
ath-u.5
for
AT4G16470
sly-u.5
for
101260595
bra-r.6
for
103869554
vvi-u.5
for
100262452
ghi-r.1
for
107962084
ghi-r.1
for
107901819
bna-r.1
for
106446359
bna-r.1
for
106421982
cit-r.1
for
102621433
nta-r.1
for
107804258
nta-r.1
for
107788438
nta-r.1
for
107807865


Ortholog ID: 11984
Species osa ath sly bra vvi ghi ghi bna bna cit nta nta nta
Symbol LOC4341572 AT4G16470 LOC101260595 LOC103869554 LOC100262452 LOC107962084 LOC107901819 LOC106446359 LOC106421982 LOC102621433 LOC107804258 LOC107788438 LOC107807865
Function* pentatricopeptide repeat-containing protein At4g16470 Tetratricopeptide repeat (TPR)-like superfamily protein thymidine kinase a-like pentatricopeptide repeat-containing protein At4g16470 thymidine kinase pentatricopeptide repeat-containing protein At4g16470 pentatricopeptide repeat-containing protein At4g16470 pentatricopeptide repeat-containing protein At4g16470 pentatricopeptide repeat-containing protein At4g16470-like thymidine kinase a pentatricopeptide repeat-containing protein At4g16470-like pentatricopeptide repeat-containing protein At4g16470-like uncharacterized LOC107807865
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03020 RNA polymerase 2
vvi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4341572 827345 101260595 103869554 100262452 107962084 107901819 106446359 106421982 102621433 107804258 107788438 107807865
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