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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123149362   pentatricopeptide repeat-containing protein 10, chloroplastic 
 ath-u.5   AT2G18940   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100806053   pentatricopeptide repeat-containing protein At2g18940, chloroplastic 
 gma-u.5   100803889   pentatricopeptide repeat-containing protein At2g18940, chloroplastic 
 sly-u.5   101263225   pentatricopeptide repeat-containing protein At2g18940, chloroplastic 
 vvi-u.5   100253054   pentatricopeptide repeat-containing protein At2g18940, chloroplastic 
 ppo-u.5   18100481   pentatricopeptide repeat-containing protein At2g18940, chloroplastic 
 mtr-u.5   11443600   pentatricopeptide repeat-containing protein At2g18940, chloroplastic 

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Top 50 coexpressed genes to 123149362 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123149362 (tae-r.2 coexpression data)

CoexMap"123149362"


taeLOC123149362 | Entrez gene ID : 123149362    
Species tae ath gma sly vvi ppo mtr bdi hvu bra cit bna sbi ghi osa sot nta cre zma
Paralog 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
GO:0005515 [list] [network] protein binding  (16249 genes)  IEA  
Protein XP_044424937.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_044424937.1)
Subcellular
localization
TargetP
chlo 8,  other 4  (predict for XP_044424937.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123149362
ath-u.5
for
AT2G18940
gma-u.5
for
100806053
gma-u.5
for
100803889
sly-u.5
for
101263225
vvi-u.5
for
100253054
ppo-u.5
for
18100481
mtr-u.5
for
11443600


Ortholog ID: 10660
Species tae tae hvu bdi sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123164939 LOC123149362 LOC123409613 LOC100844961 LOC8058454 AT2G18940 LOC100803889 LOC100806053 LOC101263225 LOC103874057 LOC100253054 LOC18100481 LOC11443600 LOC107907350 LOC107907496 LOC106430978 LOC106440843 LOC102582941 LOC102614242 LOC107816237 LOC107786373
Function* pentatricopeptide repeat-containing protein 10, chloroplastic pentatricopeptide repeat-containing protein 10, chloroplastic pentatricopeptide repeat-containing protein 10, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic uncharacterized LOC107816237 uncharacterized LOC107786373
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
ghi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00740 Riboflavin metabolism 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04144 Endocytosis 2
nta00740 Riboflavin metabolism 2
nta00790 Folate biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123164939 123149362 123409613 100844961 8058454 816411 100803889 100806053 101263225 103874057 100253054 18100481 11443600 107907350 107907496 106430978 106440843 102582941 102614242 107816237 107786373
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