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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   18100481   pentatricopeptide repeat-containing protein At2g18940, chloroplastic 
 ppo-r.4   18100481   pentatricopeptide repeat-containing protein At2g18940, chloroplastic 
 gma-u.5   100806053   pentatricopeptide repeat-containing protein At2g18940, chloroplastic 
 gma-u.5   100803889   pentatricopeptide repeat-containing protein At2g18940, chloroplastic 
 mtr-u.5   11443600   pentatricopeptide repeat-containing protein At2g18940, chloroplastic 
 ath-u.5   AT2G18940   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100253054   pentatricopeptide repeat-containing protein At2g18940, chloroplastic 
 sly-u.5   101263225   pentatricopeptide repeat-containing protein At2g18940, chloroplastic 

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Top 50 coexpressed genes to 18100481 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 18100481 (ppo-u.5 coexpression data)

CoexMap"18100481"


ppoLOC18100481 | Entrez gene ID : 18100481    
Species ppo gma mtr ath vvi sly sbi nta bra osa cre cit hvu bdi sot zma tae bna ghi
Paralog 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024459807.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_024459807.2)
Subcellular
localization
TargetP
chlo 8  (predict for XP_024459807.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
18100481

.
ppo-r.4
for
18100481

.
gma-u.5
for
100806053

.
gma-u.5
for
100803889

.
mtr-u.5
for
11443600

.
ath-u.5
for
AT2G18940

.
vvi-u.5
for
100253054

.
sly-u.5
for
101263225

.


Ortholog ID: 10660
Species ath gma gma sly bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT2G18940 LOC100803889 LOC100806053 LOC101263225 LOC103874057 LOC100253054 LOC18100481 LOC11443600 LOC123164939 LOC123149362 LOC123409613 LOC107907350 LOC107907496 LOC106430978 LOC106440843 LOC8058454 LOC102582941 LOC102614242 LOC100844961 LOC107816237 LOC107786373
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein 10, chloroplastic pentatricopeptide repeat-containing protein 10, chloroplastic pentatricopeptide repeat-containing protein 10, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic pentatricopeptide repeat-containing protein At2g18940, chloroplastic uncharacterized LOC107816237 uncharacterized LOC107786373
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
ghi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00740 Riboflavin metabolism 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04144 Endocytosis 2
nta00740 Riboflavin metabolism 2
nta00790 Folate biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816411 100803889 100806053 101263225 103874057 100253054 18100481 11443600 123164939 123149362 123409613 107907350 107907496 106430978 106440843 8058454 102582941 102614242 100844961 107816237 107786373
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