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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123159938   DNA repair protein REV1 
 tae-r.2   123148830   DNA repair protein REV1 
 tae-r.2   123165771   DNA repair protein REV1 
 hvu-r.1   123409889   DNA repair protein REV1 
 bdi-r.1   100831516   DNA repair protein REV1 
 osa-u.5   4341904   DNA repair protein REV1 
 zma-u.5   103626355   DNA repair protein REV1 
 sbi-r.1   8063788   DNA repair protein REV1 
 ath-u.5   REV1   DNA-directed DNA polymerase 
 gma-u.5   100778409   DNA repair protein REV1 
 sly-u.5   101257318   DNA repair protein REV1 
 bra-r.6   103827830   DNA repair protein REV1 
 vvi-u.5   100247553   DNA repair protein REV1 
 ppo-u.5   7490072   DNA repair protein REV1 
 mtr-u.5   25494478   DNA repair protein REV1 
 ghi-r.1   107920717   DNA repair protein REV1 
 ghi-r.1   107894697   DNA repair protein REV1 
 bna-r.1   106386355   DNA repair protein REV1 
 bna-r.1   106391142   DNA repair protein REV1 
 sot-r.1   102599689   DNA repair protein REV1 
 cit-r.1   102626428   DNA repair protein REV1 
 nta-r.1   107788193   DNA repair protein REV1 
 nta-r.1   107827331   DNA repair protein REV1 
 cre-r.1   CHLRE_12g550800v5   uncharacterized protein 

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Top 50 coexpressed genes to 123159938 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123159938 (tae-r.2 coexpression data)

CoexMap"123159938"


taeLOC123159938 | Entrez gene ID : 123159938    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 1 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03460 [list] [network] Fanconi anemia pathway (141 genes)
GO BP
GO:0070987 [list] [network] error-free translesion synthesis  (3 genes)  IEA  
GO:0042276 [list] [network] error-prone translesion synthesis  (14 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (8281 genes)  IEA  
GO MF
GO:0017125 [list] [network] deoxycytidyl transferase activity  (3 genes)  IEA  
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (66 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (104 genes)  IEA  
Protein XP_044433679.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  nucl 4,  chlo 1  (predict for XP_044433679.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_044433679.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123159938
tae-r.2
for
123148830
tae-r.2
for
123165771
hvu-r.1
for
123409889
bdi-r.1
for
100831516
osa-u.5
for
4341904
zma-u.5
for
103626355
sbi-r.1
for
8063788
ath-u.5
for
REV1
gma-u.5
for
100778409
sly-u.5
for
101257318
bra-r.6
for
103827830
vvi-u.5
for
100247553
ppo-u.5
for
7490072
mtr-u.5
for
25494478
ghi-r.1
for
107920717
ghi-r.1
for
107894697
bna-r.1
for
106386355
bna-r.1
for
106391142
sot-r.1
for
102599689
cit-r.1
for
102626428
nta-r.1
for
107788193
nta-r.1
for
107827331
cre-r.1
for
CHLRE_12g550800v5


Ortholog ID: 10979
Species tae tae tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123159938 LOC123148830 LOC123165771 LOC123409889 LOC100831516 LOC4341904 LOC103626355 LOC8063788 REV1 LOC100778409 LOC101257318 LOC103827830 LOC100247553 LOC7490072 LOC25494478 LOC107920717 LOC107894697 LOC106386355 LOC106391142 LOC102599689 LOC102626428 LOC107788193 LOC107827331 CHLRE_12g550800v5
Function* DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA-directed DNA polymerase DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 5
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 7
tae03440 Homologous recombination 7
tae03460 Fanconi anemia pathway 6
tae03030 DNA replication 4
tae03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 7
tae03030 DNA replication 5
tae03410 Base excision repair 4
tae03420 Nucleotide excision repair 4
tae03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03430 Mismatch repair 4
bra03460 Fanconi anemia pathway 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 2
vvi00920 Sulfur metabolism 2
vvi01200 Carbon metabolism 2
vvi01230 Biosynthesis of amino acids 2
vvi01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 6
ghi01040 Biosynthesis of unsaturated fatty acids 6
ghi01212 Fatty acid metabolism 6
ghi03460 Fanconi anemia pathway 4
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 6
ghi03250 Viral life cycle - HIV-1 6
ghi03460 Fanconi anemia pathway 4
ghi03430 Mismatch repair 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123159938 123148830 123165771 123409889 100831516 4341904 103626355 8063788 834504 100778409 101257318 103827830 100247553 7490072 25494478 107920717 107894697 106386355 106391142 102599689 102626428 107788193 107827331 5719658
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