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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   REV1   DNA-directed DNA polymerase 
 ath-r.7   REV1   DNA-directed DNA polymerase 
 ath-m.9   REV1   DNA-directed DNA polymerase 
 ath-e.2   REV1   DNA-directed DNA polymerase 
 ath-m.4.bio   REV1   DNA-directed DNA polymerase 
 ath-m.4.hor   REV1   DNA-directed DNA polymerase 
 ath-m.4.lig   REV1   DNA-directed DNA polymerase 
 ath-m.4.str   REV1   DNA-directed DNA polymerase 
 ath-m.4.tis   REV1   DNA-directed DNA polymerase 
 bra-r.6   103827830   DNA repair protein REV1 
 bna-r.1   106386355   DNA repair protein REV1 
 bna-r.1   106391142   DNA repair protein REV1 
 ghi-r.1   107894697   DNA repair protein REV1 
 ghi-r.1   107920717   DNA repair protein REV1 
 cit-r.1   102626428   DNA repair protein REV1 
 gma-u.5   100778409   DNA repair protein REV1 
 vvi-u.5   100247553   DNA repair protein REV1 
 ppo-u.5   7490072   DNA repair protein REV1 
 mtr-u.5   25494478   DNA repair protein REV1 
 sly-u.5   101257318   DNA repair protein REV1 
 sot-r.1   102599689   DNA repair protein REV1 
 nta-r.1   107788193   DNA repair protein REV1 
 nta-r.1   107827331   DNA repair protein REV1 
 osa-u.5   4341904   DNA repair protein REV1 
 zma-u.5   103626355   DNA repair protein REV1 
 tae-r.2   123165771   DNA repair protein REV1 
 tae-r.2   123159938   DNA repair protein REV1 
 tae-r.2   123148830   DNA repair protein REV1 
 hvu-r.1   123409889   DNA repair protein REV1 
 sbi-r.1   8063788   DNA repair protein REV1 
 bdi-r.1   100831516   DNA repair protein REV1 
 cre-r.1   CHLRE_12g550800v5   uncharacterized protein 

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Top 50 coexpressed genes to REV1 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to REV1 (ath-u.5 coexpression data)

CoexMap"834504"


athREV1 | Entrez gene ID : 834504      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03460 [list] [network] Fanconi anemia pathway (46 genes)
GO BP
GO:0042276 [list] [network] error-prone translesion synthesis  (3 genes)  IEA  
GO:0010224 [list] [network] response to UV-B  (85 genes)  IMP  
GO:0006281 [list] [network] DNA repair  (203 genes)  IEA  
GO:0006974 [list] [network] DNA damage response  (246 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (9 genes)  IDA IEA  
GO:0003684 [list] [network] damaged DNA binding  (10 genes)  IEA  
GO:0016779 [list] [network] nucleotidyltransferase activity  (73 genes)  IEA  
Protein NP_001119373.1 [sequence] [blastp]
NP_199288.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  mito 1,  cysk 1  (predict for NP_001119373.1)
chlo 6,  nucl 2,  mito 1,  cysk 1  (predict for NP_199288.4)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001119373.1)
chlo 9  (predict for NP_199288.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
REV1
ath-r.7
for
REV1
ath-m.9
for
REV1
ath-e.2
for
REV1
ath-m.4.bio
for
REV1
ath-m.4.hor
for
REV1
ath-m.4.lig
for
REV1
ath-m.4.str
for
REV1
ath-m.4.tis
for
REV1
bra-r.6
for
103827830
bna-r.1
for
106386355
bna-r.1
for
106391142
ghi-r.1
for
107894697
ghi-r.1
for
107920717
cit-r.1
for
102626428
gma-u.5
for
100778409
vvi-u.5
for
100247553
ppo-u.5
for
7490072
mtr-u.5
for
25494478
sly-u.5
for
101257318
sot-r.1
for
102599689
nta-r.1
for
107788193
nta-r.1
for
107827331
osa-u.5
for
4341904
zma-u.5
for
103626355
tae-r.2
for
123165771
tae-r.2
for
123159938
tae-r.2
for
123148830
hvu-r.1
for
123409889
sbi-r.1
for
8063788
bdi-r.1
for
100831516
cre-r.1
for
CHLRE_12g550800v5


Ortholog ID: 10979
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol REV1 LOC103827830 LOC106386355 LOC106391142 LOC107894697 LOC107920717 LOC102626428 LOC100778409 LOC100247553 LOC7490072 LOC25494478 LOC101257318 LOC102599689 LOC107788193 LOC107827331 LOC4341904 LOC103626355 LOC123165771 LOC123159938 LOC123148830 LOC123409889 LOC8063788 LOC100831516 CHLRE_12g550800v5
Function* DNA-directed DNA polymerase DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 DNA repair protein REV1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03430 Mismatch repair 4
bra03460 Fanconi anemia pathway 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 6
ghi03250 Viral life cycle - HIV-1 6
ghi03460 Fanconi anemia pathway 4
ghi03430 Mismatch repair 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 6
ghi01040 Biosynthesis of unsaturated fatty acids 6
ghi01212 Fatty acid metabolism 6
ghi03460 Fanconi anemia pathway 4
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 2
vvi00920 Sulfur metabolism 2
vvi01200 Carbon metabolism 2
vvi01230 Biosynthesis of amino acids 2
vvi01320 Sulfur cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 7
tae03030 DNA replication 5
tae03410 Base excision repair 4
tae03420 Nucleotide excision repair 4
tae03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 5
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 7
tae03440 Homologous recombination 7
tae03460 Fanconi anemia pathway 6
tae03030 DNA replication 4
tae03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04122 Sulfur relay system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834504 103827830 106386355 106391142 107894697 107920717 102626428 100778409 100247553 7490072 25494478 101257318 102599689 107788193 107827331 4341904 103626355 123165771 123159938 123148830 123409889 8063788 100831516 5719658
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