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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123180748   U1 small nuclear ribonucleoprotein 70 kDa 
 tae-r.2   123125080   U1 small nuclear ribonucleoprotein 70 kDa 
 tae-r.2   123181175   U1 small nuclear ribonucleoprotein 70 kDa 
 tae-r.2   123048333   U1 small nuclear ribonucleoprotein 70 kDa 
 hvu-r.1   123427951   U1 small nuclear ribonucleoprotein 70 kDa-like 
 hvu-r.1   123434007   U1 small nuclear ribonucleoprotein 70 kDa-like 
 bdi-r.1   100845610   U1 small nuclear ribonucleoprotein 70 kDa 
 bdi-r.1   100822879   U1 small nuclear ribonucleoprotein 70 kDa 
 osa-u.5   4347985   U1 small nuclear ribonucleoprotein 70 kDa 
 zma-u.5   542179   U1 snRNP 
 sbi-r.1   8083888   U1 small nuclear ribonucleoprotein 70 kDa 
 sbi-r.1   8084932   U1 small nuclear ribonucleoprotein 70 kDa 
 ath-u.5   U1-70K   U1 small nuclear ribonucleoprotein-70K 
 gma-u.5   100814484   U1 small nuclear ribonucleoprotein 70 kDa 
 gma-u.5   100800903   U1 small nuclear ribonucleoprotein 70 kDa 
 sly-u.5   101254653   U1 small nuclear ribonucleoprotein 70 kDa 
 bra-r.6   103837710   U1 small nuclear ribonucleoprotein 70 kDa 
 vvi-u.5   100244445   U1 small nuclear ribonucleoprotein 70 kDa 
 ppo-u.5   7473166   U1 small nuclear ribonucleoprotein 70 kDa 
 ppo-u.5   18099289   U1 small nuclear ribonucleoprotein 70 kDa 
 mtr-u.5   11405190   U1 small nuclear ribonucleoprotein 70 kDa 
 ghi-r.1   107914294   U1 small nuclear ribonucleoprotein 70 kDa 
 ghi-r.1   107900632   U1 small nuclear ribonucleoprotein 70 kDa 
 bna-r.1   106366289   U1 small nuclear ribonucleoprotein 70 kDa-like 
 bna-r.1   111211820   U1 small nuclear ribonucleoprotein 70 kDa 
 sot-r.1   102601882   U1 small nuclear ribonucleoprotein 70 kDa 
 cit-r.1   102622406   U1 small nuclear ribonucleoprotein 70 kDa 
 nta-r.1   107792003   U1 small nuclear ribonucleoprotein 70 kDa 
 nta-r.1   107759222   U1 small nuclear ribonucleoprotein 70 kDa-like 
 cre-r.1   CHLRE_16g656250v5   uncharacterized protein 

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Top 50 coexpressed genes to 123180748 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123180748 (tae-r.2 coexpression data)

CoexMap"123180748"


taeLOC123180748 | Entrez gene ID : 123180748    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 2 1 1 2 1 2 1 1 1 2 1 2 2 1 1 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03040 [list] [network] Spliceosome (1516 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (447 genes)  IEA  
GO CC
GO:0071004 [list] [network] U2-type prespliceosome  (40 genes)  IEA  
GO:0005685 [list] [network] U1 snRNP  (45 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (55 genes)  IEA  
GO MF
GO:0030619 [list] [network] U1 snRNA binding  (19 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (862 genes)  IEA  
Protein XP_044448810.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_044448810.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_044448810.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123180748
tae-r.2
for
123125080
tae-r.2
for
123181175
tae-r.2
for
123048333
hvu-r.1
for
123427951
hvu-r.1
for
123434007
bdi-r.1
for
100845610
bdi-r.1
for
100822879
osa-u.5
for
4347985
zma-u.5
for
542179
sbi-r.1
for
8083888
sbi-r.1
for
8084932
ath-u.5
for
U1-70K
gma-u.5
for
100814484
gma-u.5
for
100800903
sly-u.5
for
101254653
bra-r.6
for
103837710
vvi-u.5
for
100244445
ppo-u.5
for
7473166
ppo-u.5
for
18099289
mtr-u.5
for
11405190
ghi-r.1
for
107914294
ghi-r.1
for
107900632
bna-r.1
for
106366289
bna-r.1
for
111211820
sot-r.1
for
102601882
cit-r.1
for
102622406
nta-r.1
for
107792003
nta-r.1
for
107759222
cre-r.1
for
CHLRE_16g656250v5


Ortholog ID: 6898
Species tae tae tae hvu hvu bdi bdi osa zma sbi sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123125080 LOC123181175 LOC123042116 LOC123427951 LOC123434007 LOC100845610 LOC100822879 LOC4347985 LOC542179 LOC8083888 LOC8084932 U1-70K LOC100814484 LOC100800903 LOC101254653 LOC103837710 LOC100244445 LOC7473166 LOC18099289 LOC11405190 LOC107914294 LOC107900632 LOC106366289 LOC111211820 LOC102601882 LOC102622406 LOC107792003 LOC107759222 CHLRE_16g656250v5
Function* U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa-like U1 small nuclear ribonucleoprotein 70 kDa-like U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 snRNP U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein-70K U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa-like U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae00071 Fatty acid degradation 2
tae00592 alpha-Linolenic acid metabolism 2
tae01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
gma03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma03013 Nucleocytoplasmic transport 3
gma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 9
mtr03015 mRNA surveillance pathway 3
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 10
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 7
bna03015 mRNA surveillance pathway 7
bna03040 Spliceosome 4
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 7
cit03013 Nucleocytoplasmic transport 4
cit03015 mRNA surveillance pathway 3
cit03022 Basal transcription factors 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 14
cre03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123125080 123181175 123042116 123427951 123434007 100845610 100822879 4347985 542179 8083888 8084932 824230 100814484 100800903 101254653 103837710 100244445 7473166 18099289 11405190 107914294 107900632 106366289 111211820 102601882 102622406 107792003 107759222 5723388
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