ATTED-II : GeneCoexpression result

Species	Gene	Description
hvu-r.1	123398977	pumilio homolog 24-like
hvu-r.1	123398978	pumilio homolog 24-like
hvu-r.1	123453164	pumilio homolog 24-like
tae-r.2	123114108	pumilio homolog 24
tae-r.2	123114109	pumilio homolog 24
bdi-r.1	100846788	pumilio homolog 24
osa-u.5	4334667	pumilio homolog 24
zma-u.5	100191998	uncharacterized LOC100191998
sbi-r.1	8080200	pumilio homolog 24
ath-u.5	PUM24	pumilio 24
gma-u.5	100815996	pumilio homolog 24
gma-u.5	100780739	pumilio homolog 24
sly-u.5	101266558	pumilio homolog 24
bra-r.6	103869733	pumilio homolog 24
vvi-u.5	100255113	pumilio homolog 24
ppo-u.5	18101891	pumilio homolog 24
ppo-u.5	7496505	pumilio homolog 24
mtr-u.5	25494096	pumilio homolog 24
ghi-r.1	107888931	pumilio homolog 24
ghi-r.1	107891852	pumilio homolog 24
bna-r.1	125587096	pumilio homolog 24-like
bna-r.1	125594248	pumilio homolog 24-like
bna-r.1	106452073	pumilio homolog 24
sot-r.1	102600058	pumilio homolog 24
cit-r.1	102625301	pumilio homolog 24
nta-r.1	107780977	pumilio homolog 24
nta-r.1	107812851	pumilio homolog 24
cre-r.1	CHLRE_12g528950v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0006417 [list] [network] regulation of translation

(57 genes)

IEA

GO CC

GO:0005730 [list] [network] nucleolus

(205 genes)

IEA

GO MF

GO:0003729 [list] [network] mRNA binding

(308 genes)

IEA

Protein

XP_044949347.1 [sequence] [blastp]
XP_044949348.1 [sequence] [blastp]
XP_044949349.1 [sequence] [blastp]
XP_044949350.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 2, cysk_nucl 2, plas 1, E.R. 1, E.R._plas 1	(predict for XP_044949347.1)
nucl 4, cyto 2, cysk_nucl 2, plas 1, E.R. 1, E.R._plas 1	(predict for XP_044949348.1)
nucl 4, cyto 2, cysk_nucl 2, plas 1, E.R. 1, E.R._plas 1	(predict for XP_044949349.1)
nucl 4, cyto 2, cysk_nucl 2, plas 1, E.R. 1, E.R._plas 1	(predict for XP_044949350.1)

Subcellular
localization
TargetP

other 8	(predict for XP_044949347.1)
other 8	(predict for XP_044949348.1)
other 8	(predict for XP_044949349.1)
other 8	(predict for XP_044949350.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123398977	hvu-r.1 for 123398978	hvu-r.1 for 123453164	tae-r.2 for 123114108	tae-r.2 for 123114109	bdi-r.1 for 100846788	osa-u.5 for 4334667	zma-u.5 for 100191998	sbi-r.1 for 8080200	ath-u.5 for PUM24	gma-u.5 for 100815996	gma-u.5 for 100780739	sly-u.5 for 101266558	bra-r.6 for 103869733	vvi-u.5 for 100255113	ppo-u.5 for 18101891	ppo-u.5 for 7496505	mtr-u.5 for 25494096	ghi-r.1 for 107888931	ghi-r.1 for 107891852	bna-r.1 for 125587096	bna-r.1 for 125594248	bna-r.1 for 106452073	sot-r.1 for 102600058	cit-r.1 for 102625301	nta-r.1 for 107780977	nta-r.1 for 107812851	cre-r.1 for CHLRE_12g528950v5

Ortholog

Ortholog ID: 5740

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

PUM24

Function^*

pumilio homolog 24-like

pumilio homolog 24

uncharacterized LOC100191998

pumilio homolog 24

pumilio 24

pumilio homolog 24

pumilio homolog 24-like

pumilio homolog 24

pumilio homolog 24-like

pumilio homolog 24

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01240	Biosynthesis of cofactors	4
tae00760	Nicotinate and nicotinamide metabolism	3
tae03013	Nucleocytoplasmic transport	2
tae04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01240	Biosynthesis of cofactors	4
tae00760	Nicotinate and nicotinamide metabolism	3
tae00270	Cysteine and methionine metabolism	2
tae00330	Arginine and proline metabolism	2
tae00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	9
ath03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00970	Aminoacyl-tRNA biosynthesis	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	9
sly03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	5
bra03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03020	RNA polymerase	2
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	4
mtr03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	5
bna03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	3
bna03008	Ribosome biogenesis in eukaryotes	2
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	7
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	5
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03020	RNA polymerase	2
nta00040	Pentose and glucuronate interconversions	2
nta00052	Galactose metabolism	2
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03020	RNA polymerase	2
nta00040	Pentose and glucuronate interconversions	2
nta00052	Galactose metabolism	2
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	3

Expression

Expression pattern

Entrez Gene ID^*

123398977

123398978

123453164

123114108

123114109

123123595

100846788

4334667

100191998

8080200

820934

100815996

100780739

101266558

103869733

100255113

18101891

7496505

25494096

107888931

107891852

125594248

106452073

106401633

102600058

102625301

107780977

107812851

5722434

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123398977 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123398977 (hvu-r.1 coexpression data)


Species	hvu	tae	bdi	osa	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	2	1	1	1	1	1	2	1	1	1	2	1	2	3	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123398977 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123398977 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**