Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123402528   calcium-binding protein P-like 
 hvu-r.1   123406356   pre-mRNA-processing protein 40A-like 
 tae-r.2   123135517   pre-mRNA-processing protein 40A 
 tae-r.2   123131695   pre-mRNA-processing protein 40A 
 tae-r.2   123143093   pre-mRNA-processing protein 40A 
 bdi-r.1   100825893   pre-mRNA-processing protein 40A 
 osa-u.5   4327802   pre-mRNA-processing protein 40A 
 zma-u.5   103651641   pre-mRNA-processing protein 40A 
 zma-u.5   103651644   pre-mRNA-processing protein 40A 
 sbi-r.1   110433979   pre-mRNA-processing protein 40A 
 ath-u.5   PRP40B   pre-mRNA-processing protein 40B 
 ath-u.5   PRP40A   pre-mRNA-processing protein 40A 
 gma-u.5   100806019   pre-mRNA-processing protein 40A 
 gma-u.5   100819928   pre-mRNA-processing protein 40A 
 gma-u.5   100777778   pre-mRNA-processing protein 40A 
 sly-u.5   101267083   pre-mRNA-processing protein 40A 
 sly-u.5   101256011   pre-mRNA-processing protein 40A 
 bra-r.6   103849529   pre-mRNA-processing protein 40A 
 bra-r.6   103869430   pre-mRNA-processing protein 40B 
 vvi-u.5   100243779   pre-mRNA-processing protein 40A 
 ppo-u.5   7478754   pre-mRNA-processing protein 40A 
 ppo-u.5   7488856   pre-mRNA-processing protein 40A 
 ppo-u.5   7478673   pre-mRNA-processing protein 40A 
 mtr-u.5   25482046   pre-mRNA-processing protein 40A 
 mtr-u.5   25485314   pre-mRNA-processing protein 40A 
 ghi-r.1   107938320   pre-mRNA-processing protein 40A 
 ghi-r.1   107945158   pre-mRNA-processing protein 40A 
 ghi-r.1   107930594   pre-mRNA-processing protein 40A 
 bna-r.1   111213818   pre-mRNA-processing protein 40A 
 bna-r.1   106411204   pre-mRNA-processing protein 40B-like 
 bna-r.1   106375621   pre-mRNA-processing protein 40A 
 sot-r.1   102586174   pre-mRNA-processing protein 40A-like 
 sot-r.1   102588653   pre-mRNA-processing protein 40A-like 
 cit-r.1   102623196   pre-mRNA-processing protein 40A-like 
 cit-r.1   102622302   pre-mRNA-processing protein 40A-like 
 nta-r.1   107797839   pre-mRNA-processing protein 40A 
 nta-r.1   107803645   pre-mRNA-processing protein 40A 
 nta-r.1   107800638   pre-mRNA-processing protein 40A 
 cre-r.1   CHLRE_07g351000v5   uncharacterized protein 

close


Top 50 coexpressed genes to 123402528 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 123402528 (hvu-r.1 coexpression data)

CoexMap"123402528"


hvuLOC123402528 | Entrez gene ID : 123402528    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 1 1 2 1 2 3 2 2 1 3 2 3 3 2 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006412 [list] [network] translation  (594 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (134 genes)  IEA  
GO:0005840 [list] [network] ribosome  (449 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (445 genes)  IEA  
Protein XP_044952385.1 [sequence] [blastp]
XP_044952386.1 [sequence] [blastp]
XP_044952387.1 [sequence] [blastp]
XP_044952388.1 [sequence] [blastp]
XP_044952389.1 [sequence] [blastp]
XP_044952390.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 3,  extr 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_044952385.1)
nucl 4,  cyto 3,  extr 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_044952386.1)
nucl 4,  cyto 3,  extr 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_044952387.1)
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for XP_044952388.1)
nucl 4,  mito 1,  pero 1,  chlo 1,  cyto 1,  plas 1,  extr 1,  cyto_mito 1,  cyto_plas 1  (predict for XP_044952389.1)
cyto 7,  chlo 1,  extr 1,  cysk 1,  golg 1  (predict for XP_044952390.1)
Subcellular
localization
TargetP
chlo 5,  other 3  (predict for XP_044952385.1)
chlo 5,  other 3  (predict for XP_044952386.1)
chlo 5,  other 3  (predict for XP_044952387.1)
other 4,  chlo 4  (predict for XP_044952388.1)
chlo 5,  other 3  (predict for XP_044952389.1)
other 9  (predict for XP_044952390.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123402528
hvu-r.1
for
123406356
tae-r.2
for
123135517
tae-r.2
for
123131695
tae-r.2
for
123143093
bdi-r.1
for
100825893
osa-u.5
for
4327802
zma-u.5
for
103651641
zma-u.5
for
103651644
sbi-r.1
for
110433979
ath-u.5
for
PRP40B
ath-u.5
for
PRP40A
gma-u.5
for
100806019
gma-u.5
for
100819928
gma-u.5
for
100777778
sly-u.5
for
101267083
sly-u.5
for
101256011
bra-r.6
for
103849529
bra-r.6
for
103869430
vvi-u.5
for
100243779
ppo-u.5
for
7478754
ppo-u.5
for
7488856
ppo-u.5
for
7478673
mtr-u.5
for
25482046
mtr-u.5
for
25485314
ghi-r.1
for
107938320
ghi-r.1
for
107945158
ghi-r.1
for
107930594
bna-r.1
for
111213818
bna-r.1
for
106411204
bna-r.1
for
106375621
sot-r.1
for
102586174
sot-r.1
for
102588653
cit-r.1
for
102623196
cit-r.1
for
102622302
nta-r.1
for
107797839
nta-r.1
for
107803645
nta-r.1
for
107800638
cre-r.1
for
CHLRE_07g351000v5


Ortholog ID: 4243
Species hvu hvu tae tae tae bdi osa zma zma sbi ath ath gma gma gma sly sly bra bra vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta nta cre
Symbol LOC123402528 LOC123406356 LOC123135517 LOC123131695 LOC123143093 LOC100825893 LOC4327802 LOC103651641 LOC103651644 LOC110433979 PRP40B PRP40A LOC100806019 LOC100777778 LOC100796870 LOC101267083 LOC101256011 LOC103849529 LOC103869430 LOC100243779 LOC7478754 LOC7488856 LOC7478673 LOC25482046 LOC25485314 LOC107938320 LOC107945158 LOC107898754 LOC106411204 LOC106410777 LOC106408735 LOC102586174 LOC102588653 LOC102623196 LOC102622302 LOC107797839 LOC107800638 LOC107826429 CHLRE_07g351000v5
Function* calcium-binding protein P-like pre-mRNA-processing protein 40A-like pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40B pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40B pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40B-like pre-mRNA-processing protein 40B pre-mRNA-processing protein 40B-like pre-mRNA-processing protein 40A-like pre-mRNA-processing protein 40A-like pre-mRNA-processing protein 40A-like pre-mRNA-processing protein 40A-like pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A pre-mRNA-processing protein 40A uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03013 Nucleocytoplasmic transport 3
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03022 Basal transcription factors 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03040 Spliceosome 3
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 6
ghi03013 Nucleocytoplasmic transport 3
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03083 Polycomb repressive complex 2
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03022 Basal transcription factors 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit03013 Nucleocytoplasmic transport 2
cit03018 RNA degradation 2
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03082 ATP-dependent chromatin remodeling 4
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123402528 123406356 123135517 123131695 123143093 100825893 4327802 103651641 103651644 110433979 821504 841057 100806019 100777778 100796870 101267083 101256011 103849529 103869430 100243779 7478754 7488856 7478673 25482046 25485314 107938320 107945158 107898754 106411204 106410777 106408735 102586174 102588653 102623196 102622302 107797839 107800638 107826429 5718067
The preparation time of this page was 0.1 [sec].