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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123406320   DEAD-box ATP-dependent RNA helicase 48-like 
 tae-r.2   123140023   DEAD-box ATP-dependent RNA helicase 48 
 tae-r.2   123129118   DEAD-box ATP-dependent RNA helicase 48 
 tae-r.2   123146284   DEAD-box ATP-dependent RNA helicase 48 
 bdi-r.1   100821408   DEAD-box ATP-dependent RNA helicase 48 
 osa-u.5   4331214   DEAD-box ATP-dependent RNA helicase 48-like 
 zma-u.5   103627905   DEAD-box ATP-dependent RNA helicase 48 
 sbi-r.1   8084443   DEAD-box ATP-dependent RNA helicase 48 
 ath-u.5   AT1G63250   DEA(D/H)-box RNA helicase family protein 
 gma-u.5   100808520   probable DEAD-box ATP-dependent RNA helicase 48 
 gma-u.5   100781898   probable DEAD-box ATP-dependent RNA helicase 48 
 sly-u.5   101259722   probable DEAD-box ATP-dependent RNA helicase 48 
 bra-r.6   103838078   probable DEAD-box ATP-dependent RNA helicase 48 
 vvi-u.5   100254793   probable DEAD-box ATP-dependent RNA helicase 48 
 ppo-u.5   7478057   probable DEAD-box ATP-dependent RNA helicase 48 
 ppo-u.5   7458158   probable DEAD-box ATP-dependent RNA helicase 48 
 mtr-u.5   25502029   probable DEAD-box ATP-dependent RNA helicase 48 
 ghi-r.1   107947009   probable DEAD-box ATP-dependent RNA helicase 48 
 ghi-r.1   107936423   probable DEAD-box ATP-dependent RNA helicase 48 
 bna-r.1   106358552   probable DEAD-box ATP-dependent RNA helicase 48 
 bna-r.1   106366519   probable DEAD-box ATP-dependent RNA helicase 48 
 sot-r.1   102602129   probable DEAD-box ATP-dependent RNA helicase 48 
 cit-r.1   102624311   probable DEAD-box ATP-dependent RNA helicase 48 
 nta-r.1   107774058   putative DEAD-box ATP-dependent RNA helicase 48 
 nta-r.1   107790752   putative DEAD-box ATP-dependent RNA helicase 48 

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Top 50 coexpressed genes to 123406320 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123406320 (hvu-r.1 coexpression data)

CoexMap"123406320"


hvuLOC123406320 | Entrez gene ID : 123406320    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 2 1 1 1 2 1 2 2 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (65 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (2546 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (3739 genes)  IEA  
Protein XP_044955748.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 4,  nucl 1,  mito 1,  cysk 1,  cysk_nucl 1  (predict for XP_044955748.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_044955748.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123406320
tae-r.2
for
123140023
tae-r.2
for
123129118
tae-r.2
for
123146284
bdi-r.1
for
100821408
osa-u.5
for
4331214
zma-u.5
for
103627905
sbi-r.1
for
8084443
ath-u.5
for
AT1G63250
gma-u.5
for
100808520
gma-u.5
for
100781898
sly-u.5
for
101259722
bra-r.6
for
103838078
vvi-u.5
for
100254793
ppo-u.5
for
7478057
ppo-u.5
for
7458158
mtr-u.5
for
25502029
ghi-r.1
for
107947009
ghi-r.1
for
107936423
bna-r.1
for
106358552
bna-r.1
for
106366519
sot-r.1
for
102602129
cit-r.1
for
102624311
nta-r.1
for
107774058
nta-r.1
for
107790752


Ortholog ID: 9382
Species hvu tae tae tae bdi osa zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC123406320 LOC123140023 LOC123129118 LOC123146284 LOC100821408 LOC4331214 LOC103627905 LOC8084443 AT1G63250 LOC100808520 LOC100781898 LOC101259722 LOC103838078 LOC100254793 LOC7478057 LOC7458158 LOC25502029 LOC107947009 LOC107936423 LOC106358552 LOC106366519 LOC102602129 LOC102624311 LOC107774058 LOC107790752
Function* DEAD-box ATP-dependent RNA helicase 48-like DEAD-box ATP-dependent RNA helicase 48 DEAD-box ATP-dependent RNA helicase 48 DEAD-box ATP-dependent RNA helicase 48 DEAD-box ATP-dependent RNA helicase 48 DEAD-box ATP-dependent RNA helicase 48-like DEAD-box ATP-dependent RNA helicase 48 DEAD-box ATP-dependent RNA helicase 48 DEA(D/H)-box RNA helicase family protein probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 probable DEAD-box ATP-dependent RNA helicase 48 putative DEAD-box ATP-dependent RNA helicase 48 putative DEAD-box ATP-dependent RNA helicase 48
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae01200 Carbon metabolism 2
tae01210 2-Oxocarboxylic acid metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi00510 N-Glycan biosynthesis 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 4
bna03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
sot03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123406320 123140023 123129118 123146284 100821408 4331214 103627905 8084443 842631 100808520 100781898 101259722 103838078 100254793 7478057 7458158 25502029 107947009 107936423 106358552 106366519 102602129 102624311 107774058 107790752
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