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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1  123425218  putative pentatricopeptide repeat-containing protein At3g23330 
 osa-u.5  4343715  putative pentatricopeptide repeat-containing protein At3g23330 
 zma-u.5  100216998  uncharacterized LOC100216998 
 ath-u.5  AT3G23330  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100810402  putative pentatricopeptide repeat-containing protein At3g23330 
 sly-u.5  101254838  putative pentatricopeptide repeat-containing protein At3g23330 
 vvi-u.5  100262037  putative pentatricopeptide repeat-containing protein At3g23330 
 ppo-u.5  18094773  putative pentatricopeptide repeat-containing protein At3g23330 
 mtr-u.5  11406568  putative pentatricopeptide repeat-containing protein At3g23330 

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Top 50 coexpressed genes to 123425218 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123425218 (hvu-r.1 coexpression data)

CoexMap"123425218"


hvuLOC123425218 | Entrez gene ID : 123425218
Species hvu osa zma ath gma sly vvi ppo mtr bdi bra cit bna sbi ghi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (393 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (708 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1359 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4692 genes)  IEA  
Protein XP_044964824.1 [sequence] [blastp]
XP_044964825.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_044964824.1)
chlo 10  (predict for XP_044964825.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_044964824.1)
mito 3  (predict for XP_044964825.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

hvu-r.1
for
123425218


osa-u.5
for
4343715


zma-u.5
for
100216998


ath-u.5
for
AT3G23330


gma-u.5
for
100810402


sly-u.5
for
101254838


vvi-u.5
for
100262037


ppo-u.5
for
18094773


mtr-u.5
for
11406568



Ortholog ID: 11322
Species hvu tae tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna bna sot cit nta nta
Symbol LOC123425218 LOC123044129 LOC123187877 LOC100828742 LOC4343715 LOC100216998 LOC8054272 AT3G23330 LOC100810402 LOC101254838 LOC103828751 LOC100262037 LOC18094773 LOC11406568 LOC107893115 LOC106357889 LOC106421405 LOC102584647 LOC102615668 LOC107810444 LOC107759037
Function* putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 uncharacterized LOC100216998 putative pentatricopeptide repeat-containing protein At3g23330 Tetratricopeptide repeat (TPR)-like superfamily protein putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330 putative pentatricopeptide repeat-containing protein At3g23330
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123425218 123044129 123187877 100828742 4343715 100216998 8054272 821914 100810402 101254838 103828751 100262037 18094773 11406568 107893115 106357889 106421405 102584647 102615668 107810444 107759037
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