ATTED-II : GeneCoexpression result

Species	Gene	Description
hvu-r.1	123439690	cyclin-dependent kinase C-2
osa-u.5	4338674	cyclin-dependent kinase C-1-like
zma-u.5	100279243	putative cyclin-dependent protein kinase C family protein
zma-u.5	103625921	cyclin-dependent kinase C-2
ath-u.5	CDKC;1	cyclin-dependent kinase C;1
ath-u.5	CDKC2	cyclin dependent kinase group C2
gma-u.5	100795971	cyclin-dependent kinase C-2
gma-u.5	100780860	cyclin-dependent kinase C-2
gma-u.5	100793565	cyclin-dependent kinase C-2
sly-u.5	CDKC	cyclin dependent kinase C
sly-u.5	101268768	cyclin-dependent kinase C-2
vvi-u.5	100263383	cyclin-dependent kinase C-2
vvi-u.5	100854820	cyclin-dependent kinase C-1
ppo-u.5	7479619	cyclin-dependent kinase C-2
ppo-u.5	7493193	cyclin-dependent kinase C-2
mtr-u.5	25488867	cyclin-dependent kinase C-2
mtr-u.5	25488855	cyclin-dependent kinase C-2

Annotation

functional annotation

KEGG

GO BP

GO:0032968 [list] [network] positive regulation of transcription elongation by RNA polymerase II	(18 genes)	IEA
GO:0006468 [list] [network] protein phosphorylation	(1478 genes)	IEA

GO CC

GO:0000307 [list] [network] cyclin-dependent protein kinase holoenzyme complex	(71 genes)	IEA
GO:0005634 [list] [network] nucleus	(3241 genes)	IEA

GO MF

GO:0008353 [list] [network] RNA polymerase II CTD heptapeptide repeat kinase activity	(13 genes)	IEA
GO:0004693 [list] [network] cyclin-dependent protein serine/threonine kinase activity	(64 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2546 genes)	IEA

Protein

XP_044972318.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 2, plas 1, pero 1

(predict for XP_044972318.1)

Subcellular
localization
TargetP

other 8

(predict for XP_044972318.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	hvu-r.1 for 123439690	osa-u.5 for 4338674	zma-u.5 for 100279243	zma-u.5 for 103625921	ath-u.5 for CDKC;1	ath-u.5 for CDKC2	gma-u.5 for 100795971	gma-u.5 for 100780860	gma-u.5 for 100793565	sly-u.5 for CDKC	sly-u.5 for 101268768	vvi-u.5 for 100263383	vvi-u.5 for 100854820	ppo-u.5 for 7479619	ppo-u.5 for 7493193	mtr-u.5 for 25488867	mtr-u.5 for 25488855

Ortholog

Ortholog ID: 4123

Species

hvu

tae

bdi

osa

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

CDKC2

CDKC;1

CDKC

Function^*

cyclin-dependent kinase C-2

uncharacterized LOC104584626

cyclin-dependent kinase C-1-like

cyclin-dependent kinase C-2

putative cyclin-dependent protein kinase C family protein

cyclin-dependent kinase C-2

cyclin dependent kinase group C2

cyclin-dependent kinase C;1

cyclin-dependent kinase C-2

cyclin dependent kinase C

cyclin-dependent kinase C-2

cyclin-dependent kinase C-1

cyclin-dependent kinase C-2

cyclin-dependent kinase C-1-like

cyclin-dependent kinase C-2-like

cyclin-dependent kinase C-1

cyclin-dependent kinase C-2

cyclin-dependent kinase C-1

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2
hvu04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	3
tae00543	Exopolysaccharide biosynthesis	3
tae00920	Sulfur metabolism	3
tae01200	Carbon metabolism	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03020	RNA polymerase	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03420	Nucleotide excision repair	2
zma04141	Protein processing in endoplasmic reticulum	2
zma03440	Homologous recombination	2
zma03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03050	Proteasome	6
zma03015	mRNA surveillance pathway	3
zma03040	Spliceosome	2
zma03420	Nucleotide excision repair	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	4
ath00970	Aminoacyl-tRNA biosynthesis	4
ath03013	Nucleocytoplasmic transport	2
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	5
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03013	Nucleocytoplasmic transport	3
sly03010	Ribosome	2
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03015	mRNA surveillance pathway	4
bra04120	Ubiquitin mediated proteolysis	2
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03050	Proteasome	3
vvi04141	Protein processing in endoplasmic reticulum	2
vvi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3
ppo01200	Carbon metabolism	2
ppo01230	Biosynthesis of amino acids	2
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03050	Proteasome	4
mtr03040	Spliceosome	4
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2
ghi03015	mRNA surveillance pathway	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	2
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00562	Inositol phosphate metabolism	4
bna03040	Spliceosome	4
bna03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00562	Inositol phosphate metabolism	4
bna03040	Spliceosome	4
bna03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00970	Aminoacyl-tRNA biosynthesis	3
sot03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3
sot03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	3
cit04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4
nta03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04120	Ubiquitin mediated proteolysis	3

Expression

Expression pattern

Entrez Gene ID^*

123439690

123181876

123072591

100836145

104584626

4338674

103625921

100279243

8076846

836620

830891

100780860

100795971

101268768

544242

103855268

103832231

100854820

100263383

7479619

7493193

25488855

107900711

107930109

106382849

106382886

102582666

102591407

102621414

107760785

107804852

5719783

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 123439690 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123439690 (hvu-r.1 coexpression data)


Species	hvu	osa	zma	ath	gma	sly	vvi	ppo	mtr	bdi	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	1	2	2	3	2	2	2	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 123439690 (hvu-r.1 coexpression data)

Top 50 enrichment test to 123439690 (hvu-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**