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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123443564   probable E3 ubiquitin-protein ligase RHC2A 
 hvu-r.1   123449031   E3 ubiquitin-protein ligase RDUF2-like 
 hvu-r.1   123441568   E3 ubiquitin-protein ligase RDUF1-like 
 hvu-r.1   123445686   probable E3 ubiquitin-protein ligase RHC2A 
 tae-r.2   123080990   probable E3 ubiquitin-protein ligase RHC2A 
 tae-r.2   123072826   probable E3 ubiquitin-protein ligase RHC2A 
 bdi-r.1   100825919   E3 ubiquitin-protein ligase RDUF1 
 bdi-r.1   100821106   E3 ubiquitin-protein ligase RDUF2 
 bdi-r.1   100834239   E3 ubiquitin-protein ligase RDUF2 
 osa-u.5   4326393   probable E3 ubiquitin-protein ligase RHC2A 
 osa-u.5   4332393   E3 ubiquitin-protein ligase RDUF2 
 osa-u.5   4337586   E3 ubiquitin-protein ligase RDUF2 
 zma-u.5   107546767   Putative RING zinc finger domain superfamily protein 
 zma-u.5   103637322   probable E3 ubiquitin-protein ligase RHC2A 
 zma-u.5   100216907   putative RING zinc finger domain superfamily protein 
 sbi-r.1   8067315   probable E3 ubiquitin-protein ligase RHC2A 
 sbi-r.1   8081514   E3 ubiquitin-protein ligase RDUF2 
 ath-u.5   RHC2A   RING-H2 finger C2A 
 ath-u.5   RDUF1   zinc finger (C3HC4-type RING finger) family protein 
 ath-u.5   RDUF2   zinc finger (C3HC4-type RING finger) family protein 
 gma-u.5   100792020   E3 ubiquitin-protein ligase RDUF1 
 gma-u.5   100784364   probable E3 ubiquitin-protein ligase RHC2A 
 gma-u.5   100784822   E3 ubiquitin-protein ligase RDUF2 
 sly-u.5   101256865   probable E3 ubiquitin-protein ligase RHC2A 
 sly-u.5   101256882   probable E3 ubiquitin-protein ligase RHC2A 
 bra-r.6   103856624   E3 ubiquitin-protein ligase RDUF2 
 bra-r.6   103867017   probable E3 ubiquitin-protein ligase RHC2A 
 bra-r.6   103861302   E3 ubiquitin-protein ligase RDUF1 
 vvi-u.5   100265659   E3 ubiquitin-protein ligase RDUF1 
 vvi-u.5   100256404   probable E3 ubiquitin-protein ligase RHC2A 
 vvi-u.5   100244277   probable E3 ubiquitin-protein ligase RHC2A 
 ppo-u.5   7485690   E3 ubiquitin-protein ligase RDUF1 
 ppo-u.5   7490384   probable E3 ubiquitin-protein ligase RHC2A 
 ppo-u.5   7454941   E3 ubiquitin-protein ligase RDUF2 
 mtr-u.5   11414430   E3 ubiquitin-protein ligase RDUF2 
 mtr-u.5   11419123   E3 ubiquitin-protein ligase RDUF2 
 ghi-r.1   107891067   probable E3 ubiquitin-protein ligase RHC2A 
 ghi-r.1   107899318   probable E3 ubiquitin-protein ligase RHC2A 
 ghi-r.1   107929601   probable E3 ubiquitin-protein ligase RHC2A 
 bna-r.1   125582106   E3 ubiquitin-protein ligase RDUF2-like 
 bna-r.1   106420536   E3 ubiquitin-protein ligase RDUF2-like 
 bna-r.1   106418507   E3 ubiquitin-protein ligase RDUF2-like 
 sot-r.1   102587426   E3 ubiquitin-protein ligase RING1 
 sot-r.1   102605063   E3 ubiquitin-protein ligase RING1-like 
 cit-r.1   102625091   probable E3 ubiquitin-protein ligase RHC2A 
 cit-r.1   102628945   E3 ubiquitin-protein ligase RDUF2 
 cit-r.1   102609491   E3 ubiquitin-protein ligase RDUF2-like 
 nta-r.1   107766526   E3 ubiquitin-protein ligase RDUF1-like 
 nta-r.1   107824926   putative E3 ubiquitin-protein ligase RHC2A 
 nta-r.1   107795036   E3 ubiquitin-protein ligase RDUF1-like 

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Top 50 coexpressed genes to 123443564 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123443564 (hvu-r.1 coexpression data)

CoexMap"123443564"


hvuLOC123443564 | Entrez gene ID : 123443564    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 4 2 3 3 3 2 3 3 2 3 3 3 2 3 3 2 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (478 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (5514 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (217 genes)  IEA  
Protein XP_044975921.1 [sequence] [blastp]
XP_044975922.1 [sequence] [blastp]
XP_044975923.1 [sequence] [blastp]
XP_044975924.1 [sequence] [blastp]
XP_044975925.1 [sequence] [blastp]
XP_044975926.1 [sequence] [blastp]
XP_044975927.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1  (predict for XP_044975921.1)
nucl 9,  chlo 1  (predict for XP_044975922.1)
nucl 9,  chlo 1  (predict for XP_044975923.1)
nucl 9,  chlo 1  (predict for XP_044975924.1)
nucl 9,  chlo 1  (predict for XP_044975925.1)
nucl 9,  chlo 1  (predict for XP_044975926.1)
nucl 9,  chlo 1  (predict for XP_044975927.1)
Subcellular
localization
TargetP
chlo 9,  other 4  (predict for XP_044975921.1)
chlo 9,  other 4  (predict for XP_044975922.1)
chlo 9,  other 4  (predict for XP_044975923.1)
chlo 9,  other 4  (predict for XP_044975924.1)
chlo 9,  other 4  (predict for XP_044975925.1)
chlo 9,  other 4  (predict for XP_044975926.1)
chlo 9,  other 4  (predict for XP_044975927.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123443564
hvu-r.1
for
123449031
hvu-r.1
for
123441568
hvu-r.1
for
123445686
tae-r.2
for
123080990
tae-r.2
for
123072826
bdi-r.1
for
100825919
bdi-r.1
for
100821106
bdi-r.1
for
100834239
osa-u.5
for
4326393
osa-u.5
for
4332393
osa-u.5
for
4337586
zma-u.5
for
107546767
zma-u.5
for
103637322
zma-u.5
for
100216907
sbi-r.1
for
8067315
sbi-r.1
for
8081514
ath-u.5
for
RHC2A
ath-u.5
for
RDUF1
ath-u.5
for
RDUF2
gma-u.5
for
100792020
gma-u.5
for
100784364
gma-u.5
for
100784822
sly-u.5
for
101256865
sly-u.5
for
101256882
bra-r.6
for
103856624
bra-r.6
for
103867017
bra-r.6
for
103861302
vvi-u.5
for
100265659
vvi-u.5
for
100256404
vvi-u.5
for
100244277
ppo-u.5
for
7485690
ppo-u.5
for
7490384
ppo-u.5
for
7454941
mtr-u.5
for
11414430
mtr-u.5
for
11419123
ghi-r.1
for
107891067
ghi-r.1
for
107899318
ghi-r.1
for
107929601
bna-r.1
for
125582106
bna-r.1
for
106420536
bna-r.1
for
106418507
sot-r.1
for
102587426
sot-r.1
for
102605063
cit-r.1
for
102625091
cit-r.1
for
102628945
cit-r.1
for
102609491
nta-r.1
for
107766526
nta-r.1
for
107824926
nta-r.1
for
107795036


Ortholog ID: 952
Species hvu hvu hvu tae tae tae bdi bdi bdi osa osa zma zma zma sbi sbi ath ath ath gma gma gma sly sly bra bra bra vvi vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit cit cit nta nta nta
Symbol LOC123443564 LOC123441568 LOC123445686 LOC123080990 LOC123072826 LOC123097918 LOC100825919 LOC100821106 LOC100834239 LOC4332393 LOC4337586 LOC103637322 LOC100216907 LOC103639315 LOC8067315 LOC8081514 RHC2A RDUF1 RDUF2 LOC100792874 LOC100798563 LOC100804867 LOC101256865 LOC101256882 LOC103861302 LOC103851573 LOC103845376 LOC100265659 LOC100256404 LOC100244277 LOC7490384 LOC7454941 LOC7468627 LOC11414430 LOC25489325 LOC107929601 LOC107942404 LOC107916821 LOC125582106 LOC106420536 LOC106347545 LOC102587426 LOC102605063 LOC102625091 LOC102628945 LOC102609491 LOC107824926 LOC107795036 LOC107812906
Function* probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF1-like probable E3 ubiquitin-protein ligase RHC2A probable E3 ubiquitin-protein ligase RHC2A probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF1 E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF2 probable E3 ubiquitin-protein ligase RHC2A putative RING zinc finger domain superfamily protein putative RING zinc finger domain superfamily protein probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF2 RING-H2 finger C2A zinc finger (C3HC4-type RING finger) family protein zinc finger (C3HC4-type RING finger) family protein E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF1 E3 ubiquitin-protein ligase RDUF2 probable E3 ubiquitin-protein ligase RHC2A probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF1 E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF1 probable E3 ubiquitin-protein ligase RHC2A probable E3 ubiquitin-protein ligase RHC2A probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF1 E3 ubiquitin-protein ligase RDUF2 probable E3 ubiquitin-protein ligase RHC2A probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF1 probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF2-like E3 ubiquitin-protein ligase RDUF2-like E3 ubiquitin-protein ligase RDUF1-like E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase RING1-like probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF2-like putative E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF1-like E3 ubiquitin-protein ligase RDUF2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 2
zma00670 One carbon pool by folate 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00053 Ascorbate and aldarate metabolism 2
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath01240 Biosynthesis of cofactors 2
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123443564 123441568 123445686 123080990 123072826 123097918 100825919 100821106 100834239 4332393 4337586 103637322 100216907 103639315 8067315 8081514 818556 823815 836074 100792874 100798563 100804867 101256865 101256882 103861302 103851573 103845376 100265659 100256404 100244277 7490384 7454941 7468627 11414430 25489325 107929601 107942404 107916821 125582106 106420536 106347545 102587426 102605063 102625091 102628945 102609491 107824926 107795036 107812906
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