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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102625091   probable E3 ubiquitin-protein ligase RHC2A 
 cit-r.1   102628945   E3 ubiquitin-protein ligase RDUF2 
 cit-r.1   102609491   E3 ubiquitin-protein ligase RDUF2-like 
 ath-u.5   RHC2A   RING-H2 finger C2A 
 ath-u.5   RDUF1   zinc finger (C3HC4-type RING finger) family protein 
 ath-u.5   RDUF2   zinc finger (C3HC4-type RING finger) family protein 
 bra-r.6   103845376   E3 ubiquitin-protein ligase RDUF2 
 bra-r.6   103857876   probable E3 ubiquitin-protein ligase RHC2A 
 bra-r.6   103867017   probable E3 ubiquitin-protein ligase RHC2A 
 ghi-r.1   107891067   probable E3 ubiquitin-protein ligase RHC2A 
 ghi-r.1   107916821   probable E3 ubiquitin-protein ligase RHC2A 
 ghi-r.1   107930065   probable E3 ubiquitin-protein ligase RHC2A 
 bna-r.1   125582106   E3 ubiquitin-protein ligase RDUF2-like 
 bna-r.1   106420536   E3 ubiquitin-protein ligase RDUF2-like 
 bna-r.1   106418507   E3 ubiquitin-protein ligase RDUF2-like 
 gma-u.5   100792020   E3 ubiquitin-protein ligase RDUF1 
 gma-u.5   100784364   probable E3 ubiquitin-protein ligase RHC2A 
 gma-u.5   121172634   E3 ubiquitin-protein ligase RDUF1 
 vvi-u.5   100265659   E3 ubiquitin-protein ligase RDUF1 
 vvi-u.5   100256404   probable E3 ubiquitin-protein ligase RHC2A 
 vvi-u.5   100244277   probable E3 ubiquitin-protein ligase RHC2A 
 ppo-u.5   7485690   E3 ubiquitin-protein ligase RDUF1 
 ppo-u.5   7454941   E3 ubiquitin-protein ligase RDUF2 
 ppo-u.5   7468627   E3 ubiquitin-protein ligase RDUF1 
 mtr-u.5   11414430   E3 ubiquitin-protein ligase RDUF2 
 mtr-u.5   11419123   E3 ubiquitin-protein ligase RDUF2 
 sly-u.5   101256865   probable E3 ubiquitin-protein ligase RHC2A 
 sly-u.5   101256882   probable E3 ubiquitin-protein ligase RHC2A 
 sot-r.1   102587426   E3 ubiquitin-protein ligase RING1 
 sot-r.1   102605063   E3 ubiquitin-protein ligase RING1-like 
 nta-r.1   107766526   E3 ubiquitin-protein ligase RDUF1-like 
 nta-r.1   107795036   E3 ubiquitin-protein ligase RDUF1-like 
 nta-r.1   107812906   E3 ubiquitin-protein ligase RDUF2 
 osa-u.5   4337586   E3 ubiquitin-protein ligase RDUF2 
 osa-u.5   4332393   E3 ubiquitin-protein ligase RDUF2 
 zma-u.5   100216907   putative RING zinc finger domain superfamily protein 
 zma-u.5   103639315   putative RING zinc finger domain superfamily protein 
 zma-u.5   107546767   Putative RING zinc finger domain superfamily protein 
 tae-r.2   123186642   E3 ubiquitin-protein ligase RDUF1 
 tae-r.2   123063677   probable E3 ubiquitin-protein ligase RHC2A 
 hvu-r.1   123449031   E3 ubiquitin-protein ligase RDUF2-like 
 hvu-r.1   123441568   E3 ubiquitin-protein ligase RDUF1-like 
 hvu-r.1   123443564   probable E3 ubiquitin-protein ligase RHC2A 
 sbi-r.1   8067315   probable E3 ubiquitin-protein ligase RHC2A 
 sbi-r.1   8081514   E3 ubiquitin-protein ligase RDUF2 
 bdi-r.1   100825919   E3 ubiquitin-protein ligase RDUF1 
 bdi-r.1   100834239   E3 ubiquitin-protein ligase RDUF2 
 bdi-r.1   100821106   E3 ubiquitin-protein ligase RDUF2 

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Top 50 coexpressed genes to 102625091 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102625091 (cit-r.1 coexpression data)

CoexMap"102625091"


citLOC102625091 | Entrez gene ID : 102625091    
Species cit ath bra ghi bna gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 3 3 3 3 3 3 2 2 2 3 2 3 2 3 2 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (265 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4272 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (137 genes)  IEA  
Protein XP_006486389.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  nucl 3,  chlo 2,  cyto_mito 2,  mito_plas 2  (predict for XP_006486389.1)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for XP_006486389.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102625091
cit-r.1
for
102628945
cit-r.1
for
102609491
ath-u.5
for
RHC2A
ath-u.5
for
RDUF1
ath-u.5
for
RDUF2
bra-r.6
for
103845376
bra-r.6
for
103857876
bra-r.6
for
103867017
ghi-r.1
for
107891067
ghi-r.1
for
107916821
ghi-r.1
for
107930065
bna-r.1
for
125582106
bna-r.1
for
106420536
bna-r.1
for
106418507
gma-u.5
for
100792020
gma-u.5
for
100784364
gma-u.5
for
121172634
vvi-u.5
for
100265659
vvi-u.5
for
100256404
vvi-u.5
for
100244277
ppo-u.5
for
7485690
ppo-u.5
for
7454941
ppo-u.5
for
7468627
mtr-u.5
for
11414430
mtr-u.5
for
11419123
sly-u.5
for
101256865
sly-u.5
for
101256882
sot-r.1
for
102587426
sot-r.1
for
102605063
nta-r.1
for
107766526
nta-r.1
for
107795036
nta-r.1
for
107812906
osa-u.5
for
4337586
osa-u.5
for
4332393
zma-u.5
for
100216907
zma-u.5
for
103639315
zma-u.5
for
107546767
tae-r.2
for
123186642
tae-r.2
for
123063677
hvu-r.1
for
123449031
hvu-r.1
for
123441568
hvu-r.1
for
123443564
sbi-r.1
for
8067315
sbi-r.1
for
8081514
bdi-r.1
for
100825919
bdi-r.1
for
100834239
bdi-r.1
for
100821106


Ortholog ID: 952
Species cit cit cit ath ath ath bra bra bra ghi ghi ghi bna bna bna gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi
Symbol LOC102625091 LOC102628945 LOC102609491 RHC2A RDUF1 RDUF2 LOC103845376 LOC103861302 LOC103851573 LOC107916821 LOC107942404 LOC107929601 LOC125582106 LOC106420536 LOC106347545 LOC100792874 LOC100798563 LOC100804867 LOC100265659 LOC100256404 LOC100244277 LOC7454941 LOC7468627 LOC7490384 LOC11414430 LOC25489325 LOC101256865 LOC101256882 LOC102587426 LOC102605063 LOC107795036 LOC107812906 LOC107824926 LOC4337586 LOC4332393 LOC100216907 LOC103639315 LOC103637322 LOC123072826 LOC123080990 LOC123097918 LOC123441568 LOC123443564 LOC123445686 LOC8067315 LOC8081514 LOC100825919 LOC100834239 LOC100821106
Function* probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF2-like RING-H2 finger C2A zinc finger (C3HC4-type RING finger) family protein zinc finger (C3HC4-type RING finger) family protein E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF1 E3 ubiquitin-protein ligase RDUF2 probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF1 probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF2-like E3 ubiquitin-protein ligase RDUF2-like E3 ubiquitin-protein ligase RDUF1-like E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF1 E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF1 probable E3 ubiquitin-protein ligase RHC2A probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF1 probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF2 probable E3 ubiquitin-protein ligase RHC2A probable E3 ubiquitin-protein ligase RHC2A probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RING1 E3 ubiquitin-protein ligase RING1-like E3 ubiquitin-protein ligase RDUF1-like E3 ubiquitin-protein ligase RDUF2 putative E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF2 putative RING zinc finger domain superfamily protein putative RING zinc finger domain superfamily protein probable E3 ubiquitin-protein ligase RHC2A probable E3 ubiquitin-protein ligase RHC2A probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF1-like probable E3 ubiquitin-protein ligase RHC2A probable E3 ubiquitin-protein ligase RHC2A probable E3 ubiquitin-protein ligase RHC2A E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF1 E3 ubiquitin-protein ligase RDUF2 E3 ubiquitin-protein ligase RDUF2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00053 Ascorbate and aldarate metabolism 2
ath00520 Amino sugar and nucleotide sugar metabolism 2
ath01240 Biosynthesis of cofactors 2
ath01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 2
zma00670 One carbon pool by folate 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102625091 102628945 102609491 818556 823815 836074 103845376 103861302 103851573 107916821 107942404 107929601 125582106 106420536 106347545 100792874 100798563 100804867 100265659 100256404 100244277 7454941 7468627 7490384 11414430 25489325 101256865 101256882 102587426 102605063 107795036 107812906 107824926 4337586 4332393 100216907 103639315 103637322 123072826 123080990 123097918 123441568 123443564 123445686 8067315 8081514 100825919 100834239 100821106
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