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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123445215   E3 ubiquitin-protein ligase UPL4 
 tae-r.2   123136312   E3 ubiquitin-protein ligase UPL4 
 tae-r.2   123059417   E3 ubiquitin-protein ligase UPL4 
 tae-r.2   123182296   E3 ubiquitin-protein ligase UPL4 
 bdi-r.1   100831829   E3 ubiquitin-protein ligase UPL4 
 osa-u.5   4339037   E3 ubiquitin-protein ligase UPL4 
 zma-u.5   103635779   E3 ubiquitin-protein ligase UPL4 
 sbi-r.1   8072557   E3 ubiquitin-protein ligase UPL4 
 ath-u.5   UPL4   ubiquitin-protein ligase 4 
 gma-u.5   100798530   E3 ubiquitin-protein ligase UPL4 
 gma-u.5   100793534   E3 ubiquitin-protein ligase UPL4 
 sly-u.5   101257890   E3 ubiquitin-protein ligase UPL4 
 bra-r.6   103855501   E3 ubiquitin-protein ligase UPL4 
 bra-r.6   103850463   E3 ubiquitin-protein ligase UPL4 
 vvi-u.5   100243094   E3 ubiquitin-protein ligase UPL4 
 ppo-u.5   18100234   E3 ubiquitin-protein ligase UPL4 
 ppo-u.5   7467604   E3 ubiquitin-protein ligase UPL4 
 mtr-u.5   25484050   E3 ubiquitin-protein ligase UPL4 
 ghi-r.1   107948335   E3 ubiquitin-protein ligase UPL4 
 ghi-r.1   107899676   E3 ubiquitin-protein ligase UPL4 
 bna-r.1   106401092   E3 ubiquitin-protein ligase UPL4 
 bna-r.1   106428863   E3 ubiquitin-protein ligase UPL4 
 bna-r.1   106448641   E3 ubiquitin-protein ligase UPL4 
 sot-r.1   102581024   E3 ubiquitin-protein ligase UPL4 
 cit-r.1   102625174   E3 ubiquitin-protein ligase UPL4 
 nta-r.1   107785213   E3 ubiquitin-protein ligase UPL4 
 nta-r.1   107821932   E3 ubiquitin-protein ligase UPL4 

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Top 50 coexpressed genes to 123445215 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123445215 (hvu-r.1 coexpression data)

CoexMap"123445215"


hvuLOC123445215 | Entrez gene ID : 123445215    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 2 1 2 1 2 1 2 3 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg04120 [list] [network] Ubiquitin mediated proteolysis (227 genes)
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (85 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (197 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (217 genes)  IEA  
Protein XP_044978111.1 [sequence] [blastp]
XP_044978118.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  nucl_plas 4,  cysk 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_044978111.1)
nucl 6,  nucl_plas 4,  cysk 2,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_044978118.1)
Subcellular
localization
TargetP
other 8  (predict for XP_044978111.1)
other 8  (predict for XP_044978118.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123445215
tae-r.2
for
123136312
tae-r.2
for
123059417
tae-r.2
for
123182296
bdi-r.1
for
100831829
osa-u.5
for
4339037
zma-u.5
for
103635779
sbi-r.1
for
8072557
ath-u.5
for
UPL4
gma-u.5
for
100798530
gma-u.5
for
100793534
sly-u.5
for
101257890
bra-r.6
for
103855501
bra-r.6
for
103850463
vvi-u.5
for
100243094
ppo-u.5
for
18100234
ppo-u.5
for
7467604
mtr-u.5
for
25484050
ghi-r.1
for
107948335
ghi-r.1
for
107899676
bna-r.1
for
106401092
bna-r.1
for
106428863
bna-r.1
for
106448641
sot-r.1
for
102581024
cit-r.1
for
102625174
nta-r.1
for
107785213
nta-r.1
for
107821932


Ortholog ID: 9107
Species hvu tae tae tae bdi osa zma sbi ath gma gma sly bra bra vvi ppo ppo mtr ghi ghi bna bna bna sot cit nta nta
Symbol LOC123445215 LOC123136312 LOC123059417 LOC123182296 LOC100831829 LOC4339037 LOC103635779 LOC8072557 UPL4 LOC100798530 LOC100793534 LOC101257890 LOC103855501 LOC103850463 LOC100243094 LOC18100234 LOC7467604 LOC25484050 LOC107948335 LOC107899676 LOC106401092 LOC106428863 LOC106448641 LOC102581024 LOC102625174 LOC107785213 LOC107821932
Function* E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 ubiquitin-protein ligase 4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 5
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 8
tae04141 Protein processing in endoplasmic reticulum 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi00562 Inositol phosphate metabolism 2
sbi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly04146 Peroxisome 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 5
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 6
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna03008 Ribosome biogenesis in eukaryotes 2
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna04712 Circadian rhythm - plant 4
bna04120 Ubiquitin mediated proteolysis 3
bna00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00540 Lipopolysaccharide biosynthesis 2
bna03008 Ribosome biogenesis in eukaryotes 2
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 5
nta00592 alpha-Linolenic acid metabolism 3
nta03040 Spliceosome 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 4
nta00592 alpha-Linolenic acid metabolism 4
nta03040 Spliceosome 2
nta00564 Glycerophospholipid metabolism 2
nta00562 Inositol phosphate metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123445215 123136312 123059417 123182296 100831829 4339037 103635779 8072557 831758 100798530 100793534 101257890 103855501 103850463 100243094 18100234 7467604 25484050 107948335 107899676 106401092 106428863 106448641 102581024 102625174 107785213 107821932
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