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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123450246   endonuclease III homolog 1, chloroplastic-like 
 tae-r.2   123091164   endonuclease III homolog 1, chloroplastic 
 tae-r.2   123086811   endonuclease III homolog 1, chloroplastic 
 tae-r.2   123096165   endonuclease III homolog 1, chloroplastic 
 bdi-r.1   100836192   endonuclease III homolog 1, chloroplastic 
 osa-u.5   9268162   endonuclease III homolog 1, chloroplastic 
 zma-u.5   103640763   endonuclease III homolog 1, chloroplastic 
 sbi-r.1   8066977   endonuclease III homolog 1, chloroplastic 
 ath-u.5   ATNTH1   DNA glycosylase superfamily protein 
 ath-u.5   NTH2   endonuclease III 2 
 gma-u.5   100818398   endonuclease III homolog 1, chloroplastic 
 gma-u.5   100805799   endonuclease III homolog 2, chloroplastic 
 sly-u.5   101262253   endonuclease III homolog 2, chloroplastic-like 
 sly-u.5   101248783   endonuclease III homolog 1, chloroplastic 
 bra-r.6   103857374   endonuclease III homolog 1, chloroplastic 
 bra-r.6   103843583   endonuclease III homolog 2, chloroplastic 
 vvi-u.5   100268015   endonuclease III homolog 1, chloroplastic 
 ppo-u.5   7469594   endonuclease III homolog 1, chloroplastic 
 mtr-u.5   25492651   endonuclease III homolog 1, chloroplastic 
 mtr-u.5   11434742   endonuclease III homolog 2, chloroplastic 
 ghi-r.1   107903783   endonuclease III homolog 1, chloroplastic 
 ghi-r.1   107910452   endonuclease III homolog 1, chloroplastic 
 ghi-r.1   107914710   endonuclease III homolog 1, chloroplastic 
 bna-r.1   106445698   endonuclease III homolog 1, chloroplastic 
 bna-r.1   106437740   endonuclease III homolog 1, chloroplastic-like 
 sot-r.1   102595176   endonuclease III homolog 1, chloroplastic-like 
 sot-r.1   102596980   endonuclease III homolog 1, chloroplastic 
 cit-r.1   102616863   endonuclease III homolog 1, chloroplastic-like 
 cit-r.1   102617365   endonuclease III homolog 1, chloroplastic-like 
 nta-r.1   107814431   endonuclease III homolog 1, chloroplastic 
 nta-r.1   107798302   endonuclease III homolog 1, chloroplastic 
 nta-r.1   107762471   endonuclease III homolog 2, chloroplastic-like 
 cre-r.1   CHLRE_17g732050v5   uncharacterized protein 

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Top 50 coexpressed genes to 123450246 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123450246 (hvu-r.1 coexpression data)

CoexMap"123450246"


hvuLOC123450246 | Entrez gene ID : 123450246    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 2 2 2 2 1 1 2 3 2 2 2 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg03410 [list] [network] Base excision repair (48 genes)
GO BP
GO:0006285 [list] [network] base-excision repair, AP site formation  (5 genes)  IEA  
GO:0006284 [list] [network] base-excision repair  (26 genes)  IEA  
GO:0006289 [list] [network] nucleotide-excision repair  (49 genes)  IEA  
GO CC
GO:0042644 [list] [network] chloroplast nucleoid  (5 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3241 genes)  IEA  
GO MF
GO:0000703 [list] [network] oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity  (1 genes)  IEA  
GO:0003906 [list] [network] DNA-(apurinic or apyrimidinic site) endonuclease activity  (7 genes)  IEA  
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (28 genes)  IEA  
GO:0005506 [list] [network] iron ion binding  (457 genes)  IEA  
GO:0004497 [list] [network] monooxygenase activity  (467 genes)  IEA  
GO:0016705 [list] [network] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen  (483 genes)  IEA  
GO:0020037 [list] [network] heme binding  (619 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2113 genes)  IEA  
Protein XP_044983530.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_044983530.1)
Subcellular
localization
TargetP
mito 2  (predict for XP_044983530.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123450246
tae-r.2
for
123091164
tae-r.2
for
123086811
tae-r.2
for
123096165
bdi-r.1
for
100836192
osa-u.5
for
9268162
zma-u.5
for
103640763
sbi-r.1
for
8066977
ath-u.5
for
ATNTH1
ath-u.5
for
NTH2
gma-u.5
for
100818398
gma-u.5
for
100805799
sly-u.5
for
101262253
sly-u.5
for
101248783
bra-r.6
for
103857374
bra-r.6
for
103843583
vvi-u.5
for
100268015
ppo-u.5
for
7469594
mtr-u.5
for
25492651
mtr-u.5
for
11434742
ghi-r.1
for
107903783
ghi-r.1
for
107910452
ghi-r.1
for
107914710
bna-r.1
for
106445698
bna-r.1
for
106437740
sot-r.1
for
102595176
sot-r.1
for
102596980
cit-r.1
for
102616863
cit-r.1
for
102617365
nta-r.1
for
107814431
nta-r.1
for
107798302
nta-r.1
for
107762471
cre-r.1
for
CHLRE_17g732050v5


Ortholog ID: 5694
Species hvu tae tae tae bdi osa zma sbi ath ath gma gma sly sly bra bra vvi ppo mtr mtr ghi ghi ghi bna bna sot sot cit cit nta nta nta cre
Symbol LOC123450246 LOC123086811 LOC123096165 LOC123167902 LOC100836192 LOC9268162 LOC103640763 LOC8066977 ATNTH1 NTH2 LOC100818398 LOC100805799 LOC101262253 LOC101248783 LOC103857374 LOC103843583 LOC100268015 LOC7469594 LOC25492651 LOC11434742 LOC107903783 LOC107910452 LOC107914710 LOC106445698 LOC106437740 LOC102595176 LOC102596980 LOC102616863 LOC102617365 LOC107814431 LOC107798302 LOC107762471 CHLRE_17g732050v5
Function* endonuclease III homolog 1, chloroplastic-like endonuclease III homolog 1, chloroplastic endonuclease III homolog 1, chloroplastic uncharacterized LOC123167902 endonuclease III homolog 1, chloroplastic endonuclease III homolog 1, chloroplastic endonuclease III homolog 1, chloroplastic endonuclease III homolog 1, chloroplastic DNA glycosylase superfamily protein endonuclease III 2 endonuclease III homolog 1, chloroplastic endonuclease III homolog 2, chloroplastic endonuclease III homolog 2, chloroplastic-like endonuclease III homolog 1, chloroplastic endonuclease III homolog 1, chloroplastic endonuclease III homolog 2, chloroplastic endonuclease III homolog 1, chloroplastic endonuclease III homolog 1, chloroplastic endonuclease III homolog 1, chloroplastic endonuclease III homolog 2, chloroplastic endonuclease III homolog 1, chloroplastic endonuclease III homolog 1, chloroplastic endonuclease III homolog 1, chloroplastic endonuclease III homolog 1, chloroplastic endonuclease III homolog 1, chloroplastic-like endonuclease III homolog 1, chloroplastic-like endonuclease III homolog 1, chloroplastic endonuclease III homolog 1, chloroplastic-like endonuclease III homolog 1, chloroplastic-like endonuclease III homolog 1, chloroplastic endonuclease III homolog 1, chloroplastic endonuclease III homolog 2, chloroplastic-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03410 Base excision repair 3
tae00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 2
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04146 Peroxisome 2
ath03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma00908 Zeatin biosynthesis 2
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00750 Vitamin B6 metabolism 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna00561 Glycerolipid metabolism 3
bna00564 Glycerophospholipid metabolism 3
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123450246 123086811 123096165 123167902 100836192 9268162 103640763 8066977 817703 837100 100818398 100805799 101262253 101248783 103857374 103843583 100268015 7469594 25492651 11434742 107903783 107910452 107914710 106445698 106437740 102595176 102596980 102616863 102617365 107814431 107798302 107762471 5727040
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