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Orthologous genes in OrthoFinder**

Species Gene Description
 hvu-r.1   123452664   5'-3' exoribonuclease 4-like 
 hvu-r.1   123400127   5'-3' exoribonuclease 3-like 
 hvu-r.1   123444770   5'-3' exoribonuclease 3-like 
 tae-r.2   123062754   5'-3' exoribonuclease 3 
 bdi-r.1   100823403   5'-3' exoribonuclease 4-like 
 bdi-r.1   100835512   5'-3' exoribonuclease 3 
 osa-u.5   4324952   5'-3' exoribonuclease 3 
 osa-u.5   4329368   5'-3' exoribonuclease 2 
 osa-u.5   4334408   5'-3' exoribonuclease 4 
 zma-u.5   100501093   uncharacterized LOC100501093 
 zma-u.5   100384297   5'-3' exoribonuclease 4 
 zma-u.5   103649964   5'-3' exoribonuclease 3 
 sbi-r.1   8071116   5'-3' exoribonuclease 3 
 sbi-r.1   8058573   5'-3' exoribonuclease 2 
 sbi-r.1   8061178   5'-3' exoribonuclease 4 
 ath-u.5   XRN2   exoribonuclease 2 
 ath-u.5   XRN4   exoribonuclease 4 
 ath-u.5   XRN3   5'-3' exoribonuclease 3 
 gma-u.5   100783068   5'-3' exoribonuclease 3 
 gma-u.5   100785683   5'-3' exoribonuclease 3 
 sly-u.5   101248085   5'-3' exoribonuclease 3-like 
 sly-u.5   101258556   5'-3' exoribonuclease 3 
 sly-u.5   XRN4   protein ETHYLENE-INSENSITIVE5 
 bra-r.6   103852968   5'-3' exoribonuclease 3 
 bra-r.6   103828020   5'-3' exoribonuclease 2 
 bra-r.6   103832011   5'-3' exoribonuclease 3 
 vvi-u.5   100263222   5'-3' exoribonuclease 3 
 vvi-u.5   100260845   5'-3' exoribonuclease 3 
 ppo-u.5   7493956   5'-3' exoribonuclease 3 
 ppo-u.5   18110978   5'-3' exoribonuclease 4 
 ppo-u.5   18104156   5'-3' exoribonuclease 4 
 mtr-u.5   112421174   5'-3' exoribonuclease 3 
 mtr-u.5   112416443   5'-3' exoribonuclease 3 
 mtr-u.5   112421269   5'-3' exoribonuclease 4 
 ghi-r.1   107920080   5'-3' exoribonuclease 4 
 ghi-r.1   107901512   5'-3' exoribonuclease 4 
 ghi-r.1   107902649   5'-3' exoribonuclease 3 
 bna-r.1   106349525   5'-3' exoribonuclease 2 
 bna-r.1   111215767   5'-3' exoribonuclease 4 
 bna-r.1   106390968   5'-3' exoribonuclease 3 
 sot-r.1   102589619   5'-3' exoribonuclease 3-like 
 sot-r.1   102604337   5'-3' exoribonuclease 4 
 sot-r.1   102592073   5'-3' exoribonuclease 3 
 cit-r.1   102610368   5'-3' exoribonuclease 4 
 cit-r.1   102623051   5'-3' exoribonuclease 3 
 nta-r.1   107817672   5'-3' exoribonuclease 3 
 nta-r.1   107828154   5'-3' exoribonuclease 4-like 
 nta-r.1   107830742   5'-3' exoribonuclease 3 
 cre-r.1   CHLRE_16g679900v5   uncharacterized protein 
 cre-r.1   CHLRE_06g280050v5   uncharacterized protein 

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Top 50 coexpressed genes to 123452664 (hvu-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123452664 (hvu-r.1 coexpression data)

CoexMap"123452664"


hvuLOC123452664 | Entrez gene ID : 123452664    
Species hvu tae bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 2 3 3 3 3 2 3 3 2 3 3 3 3 3 2 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG hvg04016 [list] [network] MAPK signaling pathway - plant (187 genes)
GO BP
GO:0000956 [list] [network] nuclear-transcribed mRNA catabolic process  (53 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3241 genes)  IEA  
GO MF
GO:0004534 [list] [network] 5'-3' RNA exonuclease activity  (5 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (708 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1359 genes)  IEA  
Protein XP_044985296.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9  (predict for XP_044985296.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_044985296.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

hvu-r.1
for
123452664
hvu-r.1
for
123400127
hvu-r.1
for
123444770
tae-r.2
for
123062754
bdi-r.1
for
100823403
bdi-r.1
for
100835512
osa-u.5
for
4324952
osa-u.5
for
4329368
osa-u.5
for
4334408
zma-u.5
for
100501093
zma-u.5
for
100384297
zma-u.5
for
103649964
sbi-r.1
for
8071116
sbi-r.1
for
8058573
sbi-r.1
for
8061178
ath-u.5
for
XRN2
ath-u.5
for
XRN4
ath-u.5
for
XRN3
gma-u.5
for
100783068
gma-u.5
for
100785683
sly-u.5
for
101248085
sly-u.5
for
101258556
sly-u.5
for
XRN4
bra-r.6
for
103852968
bra-r.6
for
103828020
bra-r.6
for
103832011
vvi-u.5
for
100263222
vvi-u.5
for
100260845
ppo-u.5
for
7493956
ppo-u.5
for
18110978
ppo-u.5
for
18104156
mtr-u.5
for
112421174
mtr-u.5
for
112416443
mtr-u.5
for
112421269
ghi-r.1
for
107920080
ghi-r.1
for
107901512
ghi-r.1
for
107902649
bna-r.1
for
106349525
bna-r.1
for
111215767
bna-r.1
for
106390968
sot-r.1
for
102589619
sot-r.1
for
102604337
sot-r.1
for
102592073
cit-r.1
for
102610368
cit-r.1
for
102623051
nta-r.1
for
107817672
nta-r.1
for
107828154
nta-r.1
for
107830742
cre-r.1
for
CHLRE_16g679900v5
cre-r.1
for
CHLRE_06g280050v5


Ortholog ID: 1091
Species hvu hvu hvu tae bdi bdi osa osa osa zma zma zma sbi sbi sbi ath ath ath gma gma sly sly sly bra bra bra vvi vvi ppo ppo ppo mtr mtr mtr ghi ghi ghi bna bna bna sot sot sot cit cit nta nta nta cre cre
Symbol LOC123452664 LOC123400127 LOC123444770 LOC123071578 LOC100823403 LOC100835512 LOC4324952 LOC4329368 LOC4334408 LOC100501093 LOC100384297 LOC103641862 LOC8071116 LOC8083058 LOC8085812 XRN2 XRN4 XRN3 LOC100785683 LOC100793385 LOC101248085 LOC101258556 XRN4 LOC103852968 LOC103828020 LOC103838732 LOC100263222 LOC100253751 LOC7493956 LOC18110978 LOC18104156 LOC112421174 LOC112421269 LOC11429796 LOC107901512 LOC107943427 LOC107957582 LOC111215767 LOC106397301 LOC106421638 LOC102589619 LOC102604337 LOC102592073 LOC102610368 LOC102623051 LOC107808663 LOC107785646 LOC107780231 CHLRE_16g679900v5 CHLRE_06g280050v5
Function* 5'-3' exoribonuclease 4-like 5'-3' exoribonuclease 3-like 5'-3' exoribonuclease 3-like 5'-3' exoribonuclease 3 5'-3' exoribonuclease 4-like 5'-3' exoribonuclease 3 5'-3' exoribonuclease 3 5'-3' exoribonuclease 2 5'-3' exoribonuclease 4 uncharacterized LOC100501093 5'-3' exoribonuclease 4 5'-3' exoribonuclease 4 5'-3' exoribonuclease 3 5'-3' exoribonuclease 4 5'-3' exoribonuclease 3 exoribonuclease 2 exoribonuclease 4 5'-3' exoribonuclease 3 5'-3' exoribonuclease 3 5'-3' exoribonuclease 4 5'-3' exoribonuclease 3-like 5'-3' exoribonuclease 3 protein ETHYLENE-INSENSITIVE5 5'-3' exoribonuclease 3 5'-3' exoribonuclease 2 5'-3' exoribonuclease 4 5'-3' exoribonuclease 3 5'-3' exoribonuclease 4 5'-3' exoribonuclease 3 5'-3' exoribonuclease 4 5'-3' exoribonuclease 4 5'-3' exoribonuclease 3 5'-3' exoribonuclease 4 5'-3' exoribonuclease 4 5'-3' exoribonuclease 4 5'-3' exoribonuclease 3 5'-3' exoribonuclease 3 5'-3' exoribonuclease 4 5'-3' exoribonuclease 3-like 5'-3' exoribonuclease 3 5'-3' exoribonuclease 3-like 5'-3' exoribonuclease 4 5'-3' exoribonuclease 3 5'-3' exoribonuclease 4 5'-3' exoribonuclease 3 5'-3' exoribonuclease 4 5'-3' exoribonuclease 4 5'-3' exoribonuclease 4-like uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu04712 Circadian rhythm - plant 2
hvu03018 RNA degradation 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 6
tae03013 Nucleocytoplasmic transport 5
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 3
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 4
osa04075 Plant hormone signal transduction 2
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04016 MAPK signaling pathway - plant 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03250 Viral life cycle - HIV-1 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
ath04141 Protein processing in endoplasmic reticulum 2
ath03013 Nucleocytoplasmic transport 2
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03440 Homologous recombination 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ghi03040 Spliceosome 2
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03450 Non-homologous end-joining 3
bna04016 MAPK signaling pathway - plant 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00600 Sphingolipid metabolism 2
cit04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 3
nta04016 MAPK signaling pathway - plant 2
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03030 DNA replication 2
nta03410 Base excision repair 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta03040 Spliceosome 2
nta04120 Ubiquitin mediated proteolysis 2
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123452664 123400127 123444770 123071578 100823403 100835512 4324952 4329368 4334408 100501093 100384297 103641862 8071116 8083058 8085812 834261 841891 843900 100785683 100793385 101248085 101258556 100147714 103852968 103828020 103838732 100263222 100253751 7493956 18110978 18104156 112421174 112421269 11429796 107901512 107943427 107957582 111215767 106397301 106421638 102589619 102604337 102592073 102610368 102623051 107808663 107785646 107780231 66056704 5720902
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