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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125575050   lysine-specific demethylase JMJ14-like 
 bna-r.1   106450981   probable inactive lysine-specific demethylase JMJ19 
 bra-r.6   103858232   probable lysine-specific demethylase JMJ14 
 bra-r.6   103871604   putative lysine-specific demethylase JMJ16 
 bra-r.6   103833425   lysine-specific demethylase JMJ18 
 ath-u.5   MEE27   Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein 
 ath-u.5   AT2G38950   Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein 
 ath-u.5   JMJ14   JUMONJI 14 
 ghi-r.1   107926805   putative lysine-specific demethylase JMJ16 
 ghi-r.1   107925176   lysine-specific demethylase JMJ18 
 ghi-r.1   107922325   putative lysine-specific demethylase JMJ16 
 cit-r.1   102610903   putative lysine-specific demethylase JMJ16 
 cit-r.1   102609905   putative lysine-specific demethylase JMJ16 
 cit-r.1   102607598   lysine-specific demethylase JMJ14 
 gma-u.5   100809262   putative lysine-specific demethylase JMJ16 
 gma-u.5   100804864   putative lysine-specific demethylase JMJ16 
 vvi-u.5   100249688   putative lysine-specific demethylase JMJ16 
 vvi-u.5   100252938   lysine-specific demethylase JMJ18 
 vvi-u.5   100243365   putative lysine-specific demethylase JMJ16 
 ppo-u.5   7479746   putative lysine-specific demethylase JMJ16 
 ppo-u.5   18095778   lysine-specific demethylase JMJ18 
 ppo-u.5   7487182   putative lysine-specific demethylase JMJ16 
 mtr-u.5   25486667   lysine-specific demethylase JMJ18 
 mtr-u.5   25499272   putative lysine-specific demethylase JMJ16 
 mtr-u.5   25484581   putative lysine-specific demethylase JMJ16 
 sly-u.5   101265508   lysine-specific demethylase JMJ18 
 sly-u.5   JMJ6   lysine-specific demethylase JMJ6 
 sly-u.5   101246913   putative lysine-specific demethylase JMJ16 
 sot-r.1   102605431   lysine-specific demethylase JMJ18 
 sot-r.1   102580166   putative lysine-specific demethylase JMJ16 
 sot-r.1   102593415   putative lysine-specific demethylase JMJ16 
 nta-r.1   142177301   lysine-specific demethylase JMJ14-like 
 nta-r.1   107828455   lysine-specific demethylase JMJ18 
 nta-r.1   107813042   putative lysine-specific demethylase JMJ16 
 osa-u.5   4338351   lysine-specific demethylase JMJ18 
 osa-u.5   4338043   lysine-specific demethylase JMJ703-like 
 zma-u.5   103654141   lysine-specific demethylase JMJ703 
 zma-u.5   103631461   lysine-specific demethylase JMJ18 
 zma-u.5   100383891   uncharacterized LOC100383891 
 tae-r.2   123183333   lysine-specific demethylase JMJ703 
 tae-r.2   123070347   lysine-specific demethylase JMJ703 
 tae-r.2   123116559   lysine-specific demethylase JMJ18 
 hvu-r.1   123427966   lysine-specific demethylase JMJ18-like 
 hvu-r.1   123452400   lysine-specific demethylase JMJ703-like 
 sbi-r.1   8056417   lysine-specific demethylase JMJ703 
 sbi-r.1   110431008   lysine-specific demethylase JMJ703-like 
 sbi-r.1   8054516   lysine-specific demethylase JMJ18 
 bdi-r.1   100844367   lysine-specific demethylase JMJ703 
 bdi-r.1   100828086   lysine-specific demethylase JMJ18 
 bdi-r.1   100826668   lysine-specific demethylase JMJ18 
 cre-r.1   CHLRE_05g239250v5   uncharacterized protein 
 cre-r.1   CHLRE_03g169950v5   uncharacterized protein 
 cre-r.1   CHLRE_17g709550v5   uncharacterized protein 

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Top 50 coexpressed genes to 125575050 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125575050 (bna-r.1 coexpression data)

CoexMap"125575050"


bnaLOC125575050 | Entrez gene ID : 125575050    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 3 3 3 2 3 3 3 3 3 3 2 3 3 2 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006338 [list] [network] chromatin remodeling  (373 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0034647 [list] [network] histone H3K4me/H3K4me2/H3K4me3 demethylase activity  (26 genes)  IEA  
Protein XP_048595944.1 [sequence] [blastp]
XP_048595947.1 [sequence] [blastp]
XP_048595954.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_048595944.1)
nucl 10  (predict for XP_048595947.1)
nucl 9  (predict for XP_048595954.1)
Subcellular
localization
TargetP
chlo 8,  other 5  (predict for XP_048595944.1)
chlo 8,  other 5  (predict for XP_048595947.1)
other 7,  chlo 4  (predict for XP_048595954.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125575050
bna-r.1
for
106450981
bra-r.6
for
103858232
bra-r.6
for
103871604
bra-r.6
for
103833425
ath-u.5
for
MEE27
ath-u.5
for
AT2G38950
ath-u.5
for
JMJ14
ghi-r.1
for
107926805
ghi-r.1
for
107925176
ghi-r.1
for
107922325
cit-r.1
for
102610903
cit-r.1
for
102609905
cit-r.1
for
102607598
gma-u.5
for
100809262
gma-u.5
for
100804864
vvi-u.5
for
100249688
vvi-u.5
for
100252938
vvi-u.5
for
100243365
ppo-u.5
for
7479746
ppo-u.5
for
18095778
ppo-u.5
for
7487182
mtr-u.5
for
25486667
mtr-u.5
for
25499272
mtr-u.5
for
25484581
sly-u.5
for
101265508
sly-u.5
for
JMJ6
sly-u.5
for
101246913
sot-r.1
for
102605431
sot-r.1
for
102580166
sot-r.1
for
102593415
nta-r.1
for
142177301
nta-r.1
for
107828455
nta-r.1
for
107813042
osa-u.5
for
4338351
osa-u.5
for
4338043
zma-u.5
for
103654141
zma-u.5
for
103631461
zma-u.5
for
100383891
tae-r.2
for
123183333
tae-r.2
for
123070347
tae-r.2
for
123116559
hvu-r.1
for
123427966
hvu-r.1
for
123452400
sbi-r.1
for
8056417
sbi-r.1
for
110431008
sbi-r.1
for
8054516
bdi-r.1
for
100844367
bdi-r.1
for
100828086
bdi-r.1
for
100826668
cre-r.1
for
CHLRE_05g239250v5
cre-r.1
for
CHLRE_03g169950v5
cre-r.1
for
CHLRE_17g709550v5


Ortholog ID: 826
Species bna bra bra ath ath ath ghi ghi ghi cit cit cit gma gma vvi vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi bdi cre cre cre
Symbol LOC106411265 LOC103858232 LOC103840300 AT2G38950 PKDM7D JMJ18 LOC107926805 LOC107902743 LOC107930371 LOC102610903 LOC102609905 LOC102607598 LOC100804864 LOC100800271 LOC100249688 LOC100252938 LOC100243365 LOC18095778 LOC18104088 LOC18103470 LOC25486667 LOC25484581 LOC101265508 JMJ6 LOC101246913 LOC102605431 LOC102580166 LOC102593415 LOC142177301 LOC107780699 LOC142179375 LOC4338351 LOC4338043 LOC103631461 LOC100194382 LOC109939226 LOC123070347 LOC123116559 LOC123149162 LOC123427966 LOC123452400 LOC8056417 LOC110431008 LOC8054516 LOC100844367 LOC100828086 LOC100826668 CHLRE_05g239250v5 CHLRE_03g169950v5 CHLRE_17g709550v5
Function* probable inactive lysine-specific demethylase JMJ19 probable lysine-specific demethylase JMJ14 lysine-specific demethylase JMJ18 Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ14 putative lysine-specific demethylase JMJ16 putative lysine-specific demethylase JMJ16 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ6 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ14-like lysine-specific demethylase JMJ18 putative lysine-specific demethylase JMJ16 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ703-like lysine-specific demethylase JMJ18 uncharacterized LOC100194382 lysine-specific demethylase JMJ703-like lysine-specific demethylase JMJ703 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ703 lysine-specific demethylase JMJ18-like lysine-specific demethylase JMJ703-like lysine-specific demethylase JMJ703 lysine-specific demethylase JMJ703-like lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ703 lysine-specific demethylase JMJ18 lysine-specific demethylase JMJ18 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 2
bna00564 Glycerophospholipid metabolism 2
bna04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 4
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00910 Nitrogen metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00061 Fatty acid biosynthesis 4
ghi01040 Biosynthesis of unsaturated fatty acids 4
ghi01212 Fatty acid metabolism 4
ghi04141 Protein processing in endoplasmic reticulum 3
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00910 Nitrogen metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 3
gma03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00730 Thiamine metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo04141 Protein processing in endoplasmic reticulum 2
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00010 Glycolysis / Gluconeogenesis 2
sly00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 4
sot00010 Glycolysis / Gluconeogenesis 3
sot00040 Pentose and glucuronate interconversions 2
sot00053 Ascorbate and aldarate metabolism 2
sot00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
nta00190 Oxidative phosphorylation 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04075 Plant hormone signal transduction 4
nta00920 Sulfur metabolism 2
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 5
nta05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00230 Purine metabolism 2
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
cre03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106411265 103858232 103840300 818480 837384 839963 107926805 107902743 107930371 102610903 102609905 102607598 100804864 100800271 100249688 100252938 100243365 18095778 18104088 18103470 25486667 25484581 101265508 101244589 101246913 102605431 102580166 102593415 142177301 107780699 142179375 4338351 4338043 103631461 100194382 109939226 123070347 123116559 123149162 123427966 123452400 8056417 110431008 8054516 100844367 100828086 100826668 66053412 66052826 5717153
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