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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125575168   RNA-binding protein 25-like 
 bna-r.1   111198088   RNA-binding protein 25 
 bna-r.1   106396500   RNA-binding protein 25 
 bna-r.1   106450059   RNA-binding protein 25 
 bra-r.6   103829743   RNA-binding protein 25 
 ath-u.5   AT1G60200   splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein 
 ghi-r.1   107909631   RNA-binding protein 25 
 ghi-r.1   107886664   RNA-binding protein 25 
 cit-r.1   102609677   RNA-binding motif protein 25 
 gma-u.5   100809428   RNA-binding protein 25 
 gma-u.5   100803051   RNA-binding protein 25 
 vvi-u.5   100263874   RNA-binding motif protein 25 
 ppo-u.5   18101545   RNA-binding motif protein 25 
 ppo-u.5   7459056   RNA-binding motif protein 25 
 mtr-u.5   11405951   RNA-binding protein 25 
 sly-u.5   101253282   RNA-binding motif protein 25 
 sot-r.1   102598264   RNA-binding protein 25 
 nta-r.1   107767286   RNA-binding motif protein 25 
 nta-r.1   107763094   RNA-binding motif protein 25 
 osa-u.5   4345578   RNA-binding motif protein 25 
 zma-u.5   103653436   RNA-binding protein 25 
 zma-u.5   103643327   RNA-binding protein 25 
 tae-r.2   123170041   RNA-binding protein 25 
 tae-r.2   123162187   RNA-binding protein 25 
 tae-r.2   123154525   RNA-binding protein 25 
 hvu-r.1   123412430   RNA-binding protein 25 
 sbi-r.1   8075609   RNA-binding protein 25 
 bdi-r.1   100842258   RNA-binding protein 25 
 cre-r.1   CHLRE_08g375084v5   uncharacterized protein 

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Top 50 coexpressed genes to 125575168 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125575168 (bna-r.1 coexpression data)

CoexMap"125575168"


bnaLOC125575168 | Entrez gene ID : 125575168    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 2 1 2 1 2 1 1 1 2 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03040 [list] [network] Spliceosome (912 genes)
GO BP
GO:0006397 [list] [network] mRNA processing  (684 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_048629507.1 [sequence] [blastp]
XP_048629508.1 [sequence] [blastp]
XP_048629509.1 [sequence] [blastp]
XP_048629510.1 [sequence] [blastp]
XP_048629511.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_048629507.1)
nucl 9,  cyto 1  (predict for XP_048629508.1)
chlo 6,  pero 2,  nucl 1  (predict for XP_048629509.1)
chlo 6,  pero 2,  nucl 1  (predict for XP_048629510.1)
chlo 6,  pero 2,  nucl 1  (predict for XP_048629511.1)
Subcellular
localization
TargetP
chlo 8,  other 6  (predict for XP_048629507.1)
chlo 8,  other 6  (predict for XP_048629508.1)
chlo 4,  mito 4  (predict for XP_048629509.1)
chlo 4,  mito 4  (predict for XP_048629510.1)
chlo 4,  mito 4  (predict for XP_048629511.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125575168
bna-r.1
for
111198088
bna-r.1
for
106396500
bna-r.1
for
106450059
bra-r.6
for
103829743
ath-u.5
for
AT1G60200
ghi-r.1
for
107909631
ghi-r.1
for
107886664
cit-r.1
for
102609677
gma-u.5
for
100809428
gma-u.5
for
100803051
vvi-u.5
for
100263874
ppo-u.5
for
18101545
ppo-u.5
for
7459056
mtr-u.5
for
11405951
sly-u.5
for
101253282
sot-r.1
for
102598264
nta-r.1
for
107767286
nta-r.1
for
107763094
osa-u.5
for
4345578
zma-u.5
for
103653436
zma-u.5
for
103643327
tae-r.2
for
123170041
tae-r.2
for
123162187
tae-r.2
for
123154525
hvu-r.1
for
123412430
sbi-r.1
for
8075609
bdi-r.1
for
100842258
cre-r.1
for
CHLRE_08g375084v5


Ortholog ID: 8287
Species bna bna bna bra ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC125575168 LOC111198088 LOC106396500 LOC103829743 AT1G60200 LOC107909631 LOC107886664 LOC102609677 LOC100809428 LOC100803051 LOC100263874 LOC18101545 LOC7459056 LOC11405951 LOC101253282 LOC102598264 LOC107767286 LOC107763094 LOC4345578 LOC103653436 LOC103643327 LOC123170041 LOC123162187 LOC123154525 LOC123412430 LOC8075609 LOC100842258 CHLRE_08g375084v5
Function* RNA-binding protein 25-like RNA-binding protein 25 RNA-binding protein 25 RNA-binding protein 25 splicing factor PWI domain-containing protein / RNA recognition motif (RRM)-containing protein RNA-binding protein 25 RNA-binding protein 25 RNA-binding motif protein 25 RNA-binding protein 25 RNA-binding protein 25 RNA-binding motif protein 25 RNA-binding motif protein 25 RNA-binding motif protein 25 RNA-binding protein 25 RNA-binding motif protein 25 RNA-binding protein 25 RNA-binding motif protein 25 RNA-binding motif protein 25 RNA-binding motif protein 25 RNA-binding protein 25 RNA-binding protein 25 RNA-binding protein 25 RNA-binding protein 25 RNA-binding protein 25 RNA-binding protein 25 RNA-binding protein 25 RNA-binding protein 25 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03013 Nucleocytoplasmic transport 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 7
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
sly03013 Nucleocytoplasmic transport 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 8
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 8
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 7
tae03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 125575168 111198088 106396500 103829743 842315 107909631 107886664 102609677 100809428 100803051 100263874 18101545 7459056 11405951 101253282 102598264 107767286 107763094 4345578 103653436 103643327 123170041 123162187 123154525 123412430 8075609 100842258 5719954
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