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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125577678   pentatricopeptide repeat-containing protein At3g26540-like 
 ath-u.5   AT3G26540   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100775626   pentatricopeptide repeat-containing protein At3g26540 
 vvi-u.5   100253985   pentatricopeptide repeat-containing protein At3g26540 
 mtr-u.5   25489737   pentatricopeptide repeat-containing protein At3g26540 
 sly-u.5   101266932   pentatricopeptide repeat-containing protein At3g26540 
 zma-u.5   103641671   pentatricopeptide repeat-containing protein At3g26540 

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Top 50 coexpressed genes to 125577678 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125577678 (bna-r.1 coexpression data)

CoexMap"125577678"


bnaLOC125577678 | Entrez gene ID : 125577678    
Species bna ath gma vvi mtr sly zma hvu cit bra ghi osa ppo sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_048595232.1 [sequence] [blastp]
XP_048595233.1 [sequence] [blastp]
XP_048595234.1 [sequence] [blastp]
XP_048595235.1 [sequence] [blastp]
XP_048595236.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_048595232.1)
chlo 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_048595233.1)
chlo 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_048595234.1)
chlo 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_048595235.1)
chlo 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for XP_048595236.1)
Subcellular
localization
TargetP
other 4  (predict for XP_048595232.1)
other 4  (predict for XP_048595233.1)
other 4  (predict for XP_048595234.1)
other 4  (predict for XP_048595235.1)
other 4  (predict for XP_048595236.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125577678
ath-u.5
for
AT3G26540
gma-u.5
for
100775626
vvi-u.5
for
100253985
mtr-u.5
for
25489737
sly-u.5
for
101266932
zma-u.5
for
103641671


Ortholog ID: 10117
Species bna bra ath ghi ghi cit gma vvi mtr sly sot nta nta zma tae tae hvu sbi bdi
Symbol LOC106360378 LOC103846352 AT3G26540 LOC107949522 LOC107890139 LOC107174240 LOC100775626 LOC100253985 LOC25489737 LOC101266932 LOC102581455 LOC107814536 LOC107763155 LOC103641671 LOC123189264 LOC123053361 LOC123426770 LOC8080316 LOC100844847
Function* pentatricopeptide repeat-containing protein At3g26540-like pentatricopeptide repeat-containing protein At3g26540 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g26540 pentatricopeptide repeat-containing protein At3g26540 pentatricopeptide repeat-containing protein At3g26540 pentatricopeptide repeat-containing protein At3g26540 pentatricopeptide repeat-containing protein At3g26540 pentatricopeptide repeat-containing protein At3g26540 pentatricopeptide repeat-containing protein At3g26540 pentatricopeptide repeat-containing protein At3g26540 pentatricopeptide repeat-containing protein At3g26540-like pentatricopeptide repeat-containing protein At3g26540-like pentatricopeptide repeat-containing protein At3g26540 pentatricopeptide repeat-containing protein At3g26540 pentatricopeptide repeat-containing protein At3g26540 pentatricopeptide repeat-containing protein At3g26540 pentatricopeptide repeat-containing protein At3g26540 pentatricopeptide repeat-containing protein At3g26540
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03018 RNA degradation 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106360378 103846352 822262 107949522 107890139 107174240 100775626 100253985 25489737 101266932 102581455 107814536 107763155 103641671 123189264 123053361 123426770 8080316 100844847
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