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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125593276   probable nucleolar protein 5-1 
 ath-u.5   AT3G05060   NOP56-like pre RNA processing ribonucleoprotein 
 ath-u.5   AT5G27120   NOP56-like pre RNA processing ribonucleoprotein 
 gma-u.5   100784721   probable nucleolar protein 5-2 
 gma-u.5   100775301   probable nucleolar protein 5-2 
 vvi-u.5   100248675   probable nucleolar protein 5-2 
 ppo-u.5   7473909   probable nucleolar protein 5-2 
 ppo-u.5   18098893   probable nucleolar protein 5-1 
 mtr-u.5   11436777   probable nucleolar protein 5-2 
 mtr-u.5   11437645   probable nucleolar protein 5-1 
 sly-u.5   101255995   probable nucleolar protein 5-2 
 sly-u.5   101263757   MAR-binding protein 
 osa-u.5   4332840   probable nucleolar protein 5-2 
 osa-u.5   4332841   probable nucleolar protein 5-2 
 zma-u.5   103649398   probable nucleolar protein 5-2 
 zma-u.5   103639139   probable nucleolar protein 5-2 
 zma-u.5   100384739   putative nucleolar protein 5-1 

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Top 50 coexpressed genes to 125593276 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125593276 (bna-r.1 coexpression data)

CoexMap"125593276"


bnaLOC125593276 | Entrez gene ID : 125593276    
Species bna ath gma vvi ppo mtr sly osa zma bdi hvu bra cit sbi ghi sot nta cre tae
Paralog 1 2 2 1 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03008 [list] [network] Ribosome biogenesis in eukaryotes (6477 genes)
GO BP
GO CC
GO:0031428 [list] [network] box C/D methylation guide snoRNP complex  (36 genes)  IEA  
GO:0032040 [list] [network] small-subunit processome  (155 genes)  IEA  
GO MF
GO:0030515 [list] [network] snoRNA binding  (74 genes)  IEA  
Protein XP_048625639.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2  (predict for XP_048625639.1)
Subcellular
localization
TargetP
other 4,  scret 4  (predict for XP_048625639.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125593276
ath-u.5
for
AT3G05060
ath-u.5
for
AT5G27120
gma-u.5
for
100784721
gma-u.5
for
100775301
vvi-u.5
for
100248675
ppo-u.5
for
7473909
ppo-u.5
for
18098893
mtr-u.5
for
11436777
mtr-u.5
for
11437645
sly-u.5
for
101255995
sly-u.5
for
101263757
osa-u.5
for
4332840
osa-u.5
for
4332841
zma-u.5
for
103649398
zma-u.5
for
103639139
zma-u.5
for
100384739


Ortholog ID: 3568
Species bna bna bra bra ath ath ghi ghi cit cit gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC106348654 LOC125606782 LOC103854646 LOC103837322 AT5G27120 AT3G05060 LOC107899143 LOC107894650 LOC102607893 LOC102617154 LOC100784721 LOC100775301 LOC100248675 LOC18098893 LOC7473909 LOC11437645 LOC11436777 LOC101255995 LOC101263757 LOC102585448 LOC102591435 LOC107813446 LOC107803219 LOC4332840 LOC4332841 LOC103639139 LOC103649398 LOC123187584 LOC123051654 LOC123424804 LOC123448571 LOC110431124 LOC8079815 LOC100841812 LOC100838508 CHLRE_10g441400v5
Function* probable nucleolar protein 5-1 probable nucleolar protein 5-1 probable nucleolar protein 5-1 probable nucleolar protein 5-1 NOP56-like pre RNA processing ribonucleoprotein NOP56-like pre RNA processing ribonucleoprotein probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-1 probable nucleolar protein 5-2 probable nucleolar protein 5-1 probable nucleolar protein 5-2 probable nucleolar protein 5-2 MAR-binding protein probable nucleolar protein 5-2 probable nucleolar protein 5-2 putative nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 probable nucleolar protein 5-2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 9
bna00230 Purine metabolism 2
bna01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 4
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 8
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 8
nta03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 7
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 7
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 6
bdi03020 RNA polymerase 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106348654 125606782 103854646 103837322 832770 819668 107899143 107894650 102607893 102617154 100784721 100775301 100248675 18098893 7473909 11437645 11436777 101255995 101263757 102585448 102591435 107813446 107803219 4332840 4332841 103639139 103649398 123187584 123051654 123424804 123448571 110431124 8079815 100841812 100838508 5715998
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