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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   142164313   pentatricopeptide repeat-containing protein At1g05600-like 
 sly-u.5   101261725   pentatricopeptide repeat-containing protein At1g05600 
 ath-u.5   EMB3101   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100803568   pentatricopeptide repeat-containing protein At1g05600 
 vvi-u.5   100256815   pentatricopeptide repeat-containing protein At1g05600 
 ppo-u.5   7478799   pentatricopeptide repeat-containing protein At1g05600 
 mtr-u.5   11432583   pentatricopeptide repeat-containing protein At1g05600 
 mtr-u.5   11427844   pentatricopeptide repeat-containing protein At1g05600-like 
 osa-u.5   4324326   pentatricopeptide repeat-containing protein At1g05600 
 zma-u.5   118473164   pentatricopeptide repeat-containing protein At1g05600 

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Top 50 coexpressed genes to 142164313 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 142164313 (nta-r.1 coexpression data)

CoexMap"142164313"


ntaLOC142164313 | Entrez gene ID : 142164313    
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (26 genes)  IEA  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (28 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1165 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_075078358.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 2,  cyto_nucl 2,  mito 1,  cysk_nucl 1  (predict for XP_075078358.1)
Subcellular
localization
TargetP
mito 7  (predict for XP_075078358.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
142164313
sly-u.5
for
101261725
ath-u.5
for
EMB3101
gma-u.5
for
100803568
vvi-u.5
for
100256815
ppo-u.5
for
7478799
mtr-u.5
for
11432583
mtr-u.5
for
11427844
osa-u.5
for
4324326
zma-u.5
for
118473164


Ortholog ID: 10427
Species nta nta sly sot ath gma bra vvi ppo mtr mtr ghi bna bna cit osa zma tae tae hvu sbi bdi
Symbol LOC107764001 LOC142164313 LOC101261725 LOC102598656 EMB3101 LOC100803568 LOC103844108 LOC100256815 LOC7478799 LOC11427844 LOC11432583 LOC107945106 LOC106396999 LOC106371171 LOC102620519 LOC4324326 LOC118473164 LOC123080241 LOC123063033 LOC123442060 LOC8063121 LOC100841629
Function* pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600-like pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600-like pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600-like pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600-like pentatricopeptide repeat-containing protein At1g05600 pentatricopeptide repeat-containing protein At1g05600
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03250 Viral life cycle - HIV-1 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107764001 142164313 101261725 102598656 837065 100803568 103844108 100256815 7478799 11427844 11432583 107945106 106396999 106371171 102620519 4324326 118473164 123080241 123063033 123442060 8063121 100841629
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