ATTED-II : GeneCoexpression result

Species	Gene	Description
nta-r.1	142176002	intermembrane lipid transfer protein VPS13-like
sly-u.5	101246789	intermembrane lipid transfer protein VPS13
ath-u.5	AT5G24740	vacuolar protein sorting-associated protein, putative (DUF1162)
gma-u.5	100783352	uncharacterized LOC100783352
vvi-u.5	100245550	uncharacterized LOC100245550
ppo-u.5	18096003	uncharacterized LOC18096003
mtr-u.5	11424203	uncharacterized LOC11424203
osa-u.5	4344518	intermembrane lipid transfer protein VPS13
zma-u.5	100384121	uncharacterized LOC100384121

functional annotation

KEGG

GO BP

GO:0045053 [list] [network] protein retention in Golgi apparatus	(8 genes)	IEA
GO:0006623 [list] [network] protein targeting to vacuole	(30 genes)	IEA

GO CC

GO MF

Protein

XP_075099127.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, chlo 4, nucl 1, pero 1

(predict for XP_075099127.1)

Subcellular
localization
TargetP

other 7

(predict for XP_075099127.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	nta-r.1 for 142176002	sly-u.5 for 101246789	ath-u.5 for AT5G24740	gma-u.5 for 100783352	vvi-u.5 for 100245550	ppo-u.5 for 18096003	mtr-u.5 for 11424203	osa-u.5 for 4344518	zma-u.5 for 100384121

Ortholog ID: 8623

Species

nta

sly

sot

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

intermembrane lipid transfer protein VPS13-like

uncharacterized LOC107821075

intermembrane lipid transfer protein VPS13

vacuolar protein sorting-associated protein 13A-like

uncharacterized LOC102596584

vacuolar protein sorting-associated protein, putative (DUF1162)

uncharacterized LOC100783352

uncharacterized LOC103874343

uncharacterized LOC100245550

uncharacterized LOC18096003

uncharacterized LOC11424203

uncharacterized LOC107927572

uncharacterized LOC121215884

uncharacterized LOC106447428

uncharacterized LOC106348493

uncharacterized LOC102613344

intermembrane lipid transfer protein VPS13

uncharacterized LOC100384121

uncharacterized LOC123156515

uncharacterized LOC123166530

uncharacterized LOC123408636

uncharacterized LOC8066100

putative vacuolar protein sorting-associated protein 13A

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	2
nta00030	Pentose phosphate pathway	2
nta00500	Starch and sucrose metabolism	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	2
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03440	Homologous recombination	2
ath03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	3
bra03018	RNA degradation	2
bra00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	5
mtr03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03440	Homologous recombination	4
bna03450	Non-homologous end-joining	4
bna03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03440	Homologous recombination	4
bna03450	Non-homologous end-joining	4
bna00564	Glycerophospholipid metabolism	2
bna04070	Phosphatidylinositol signaling system	2
bna04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3
tae04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2
hvu03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	3

Expression

Expression pattern

Entrez Gene ID^*

142176002

107821075

101246789

102596923

102596584

832543

100783352

103874343

100245550

18096003

11424203

107927572

121215884

106447428

106348493

102613344

4344518

100384121

123156515

123166530

123408636

8066100

100822443

5722810

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 142176002 (nta-r.1 coexpression data)

Top 50 enrichment test to 142176002 (nta-r.1 coexpression data)


Species	nta	sly	ath	gma	vvi	ppo	mtr	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	cre	tae
Paralog	1	1	1	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 142176002 (nta-r.1 coexpression data)

Top 50 enrichment test to 142176002 (nta-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**